Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC112225.1-201ENST00000508230 297 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 OR9L1P-201ENST00000529493 933 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.77□□□□□ -1.33
BRCA2P51587 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.77□□□□□ -1.33
BRCA2P51587 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.77□□□□□ -1.33
BRCA2P51587 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
BRCA2P51587 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 AC016739.1-201ENST00000405359 345 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 KIF4CP-201ENST00000422742 1279 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.77□□□□□ -1.33
BRCA2P51587 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.77□□□□□ -1.33
BRCA2P51587 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.77□□□□□ -1.33
BRCA2P51587 AL139156.3-201ENST00000454802 394 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
BRCA2P51587 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.77□□□□□ -1.33
BRCA2P51587 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.77□□□□□ -1.33
BRCA2P51587 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.77□□□□□ -1.33
BRCA2P51587 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.77□□□□□ -1.33
BRCA2P51587 MIR8080-201ENST00000622224 89 ntBASIC6.77□□□□□ -1.33
BRCA2P51587 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.77□□□□□ -1.33
BRCA2P51587 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.77□□□□□ -1.33
BRCA2P51587 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
BRCA2P51587 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
BRCA2P51587 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.77□□□□□ -1.33
BRCA2P51587 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
BRCA2P51587 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.76□□□□□ -1.33
BRCA2P51587 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.76□□□□□ -1.33
BRCA2P51587 STRADBP1-201ENST00000478954 1281 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 AC115837.1-201ENST00000517662 1001 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 AC026367.2-201ENST00000610630 553 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 AL589647.1-201ENST00000402485 466 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.76□□□□□ -1.33
BRCA2P51587 AL157777.1-201ENST00000468100 304 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 AP001922.4-201ENST00000526967 290 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
BRCA2P51587 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
BRCA2P51587 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
BRCA2P51587 AL356967.1-201ENST00000406305 431 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.76□□□□□ -1.33
BRCA2P51587 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 RN7SL591P-201ENST00000496150 292 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.76□□□□□ -1.33
BRCA2P51587 AC021146.10-201ENST00000515628 706 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.76□□□□□ -1.33
BRCA2P51587 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.76□□□□□ -1.33
BRCA2P51587 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.76□□□□□ -1.33
BRCA2P51587 AL021918.2-201ENST00000613415 194 ntBASIC6.76□□□□□ -1.33
BRCA2P51587 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
BRCA2P51587 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.76□□□□□ -1.33
BRCA2P51587 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
BRCA2P51587 MAPK10-287ENST00000641217 3037 ntBASIC6.75□□□□□ -1.33
BRCA2P51587 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.75□□□□□ -1.33
BRCA2P51587 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.75□□□□□ -1.33
BRCA2P51587 AC013399.1-201ENST00000450311 418 ntBASIC6.75□□□□□ -1.33
BRCA2P51587 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.75□□□□□ -1.33
BRCA2P51587 IGHV3-57-201ENST00000520143 280 ntBASIC6.75□□□□□ -1.33
BRCA2P51587 AL049539.1-201ENST00000611964 459 ntBASIC6.75□□□□□ -1.33
BRCA2P51587 MIR6085-201ENST00000618314 110 ntBASIC6.75□□□□□ -1.33
BRCA2P51587 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC6.75□□□□□ -1.33
BRCA2P51587 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
BRCA2P51587 AC012254.3-201ENST00000591183 2117 ntBASIC6.75□□□□□ -1.33
BRCA2P51587 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
BRCA2P51587 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BRCA2P51587 SNORA43.1-201ENST00000364863 140 ntBASIC6.75□□□□□ -1.33
BRCA2P51587 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
BRCA2P51587 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.75□□□□□ -1.33
BRCA2P51587 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC6.75□□□□□ -1.33
BRCA2P51587 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.75□□□□□ -1.33
BRCA2P51587 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.75□□□□□ -1.33
BRCA2P51587 OR11J2P-201ENST00000555298 907 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms