Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SAGE3P-201ENST00000619800 1635 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC217777.1-201ENST00000570034 1471 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 AC005702.3-201ENST00000585345 1447 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 SMG1P5-202ENST00000529428 4219 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 SMG1P2-201ENST00000566127 4221 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 NEK2P2-201ENST00000438441 1338 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCL3L1P16619 RNU1-84P-201ENST00000365447 164 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 MIR551B-201ENST00000384984 96 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.35□□□□□ -1.55
CCL3L1P16619 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC003989.1-201ENST00000434569 565 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 AL645939.3-201ENST00000435408 225 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 RPL12P49-201ENST00000441100 121 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.35□□□□□ -1.55
CCL3L1P16619 AL356121.1-201ENST00000442911 156 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.35□□□□□ -1.55
CCL3L1P16619 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.35□□□□□ -1.55
CCL3L1P16619 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC139272.1-201ENST00000505516 640 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 AC131392.1-201ENST00000506490 633 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.35□□□□□ -1.55
CCL3L1P16619 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.35□□□□□ -1.55
CCL3L1P16619 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.35□□□□□ -1.55
CCL3L1P16619 SYPL1P2-201ENST00000582878 727 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC005479.3-201ENST00000602790 431 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 AC019257.2-201ENST00000605539 497 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC011592.1-201ENST00000624647 3634 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC005618.1-201ENST00000606901 3148 ntBASIC5.35□□□□□ -1.55
CCL3L1P16619 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.35□□□□□ -1.55
CCL3L1P16619 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.34□□□□□ -1.55
CCL3L1P16619 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.34□□□□□ -1.55
CCL3L1P16619 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CCL3L1P16619 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CCL3L1P16619 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 RNA5SP188-201ENST00000362916 129 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 SNORA64.3-201ENST00000365647 134 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.34□□□□□ -1.55
CCL3L1P16619 AC009500.1-201ENST00000420684 583 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 RPL23AP85-201ENST00000421838 433 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 AC128677.1-201ENST00000436016 442 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.34□□□□□ -1.55
CCL3L1P16619 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.34□□□□□ -1.55
CCL3L1P16619 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.34□□□□□ -1.55
CCL3L1P16619 AL445991.1-201ENST00000450381 475 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 RN7SL393P-201ENST00000463588 296 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 SNRPCP11-201ENST00000492453 205 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.34□□□□□ -1.55
CCL3L1P16619 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.34□□□□□ -1.55
CCL3L1P16619 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.34□□□□□ -1.55
CCL3L1P16619 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.34□□□□□ -1.55
CCL3L1P16619 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.34□□□□□ -1.55
CCL3L1P16619 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.34□□□□□ -1.55
CCL3L1P16619 GAPDHP41-201ENST00000613707 975 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 MIR6085-201ENST00000618314 110 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 MIR6813-201ENST00000621638 56 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.34□□□□□ -1.55
CCL3L1P16619 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 PABPC1P8-201ENST00000452851 2086 ntBASIC5.34□□□□□ -1.55
CCL3L1P16619 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.34□□□□□ -1.55
CCL3L1P16619 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.34□□□□□ -1.55
CCL3L1P16619 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCL3L1P16619 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CCL3L1P16619 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCL3L1P16619 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCL3L1P16619 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CCL3L1P16619 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCL3L1P16619 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCL3L1P16619 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 CDY5P-201ENST00000411487 1580 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms