Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC241377.2-202ENST00000636462 997 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC008691.1-209ENST00000642094 814 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 AL136298.2-201ENST00000556497 1570 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL6A2P12110 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL6A2P12110 MIR16-2-201ENST00000362117 81 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 RN7SKP107-201ENST00000364157 290 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 FAM204BP-201ENST00000369171 701 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL6A2P12110 RNA5SP297-201ENST00000391029 113 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 CXADRP1-201ENST00000398098 1095 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 RMRPP5-201ENST00000411156 267 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 OR51B3P-201ENST00000412287 913 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.07□□□□□ -1.28
COL6A2P12110 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 AC000362.1-201ENST00000433725 425 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL6A2P12110 AC013429.1-201ENST00000456604 422 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 AC008379.1-201ENST00000463655 464 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 AC117392.1-201ENST00000487061 596 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 RN7SL516P-201ENST00000496127 297 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.07□□□□□ -1.28
COL6A2P12110 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC7.07□□□□□ -1.28
COL6A2P12110 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.07□□□□□ -1.28
COL6A2P12110 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.07□□□□□ -1.28
COL6A2P12110 OR9L1P-201ENST00000529493 933 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.07□□□□□ -1.28
COL6A2P12110 RN7SL667P-201ENST00000582817 298 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 OR7E94P-202ENST00000601375 790 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 RPS28P1-201ENST00000604589 187 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 AC004839.1-201ENST00000610269 501 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 CXADRP3-202ENST00000617265 1100 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 AL512427.1-201ENST00000618593 349 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 AP002791.1-201ENST00000623291 381 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
COL6A2P12110 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 AC005034.3-201ENST00000604845 1747 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 AC079949.2-201ENST00000617117 2933 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 CASC19-255ENST00000641733 1385 ntBASIC7.07□□□□□ -1.28
COL6A2P12110 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL6A2P12110 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL6A2P12110 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms