Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 NDUFA3P4-201ENST00000560814 250 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 MIR4470-201ENST00000583453 72 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC004839.1-201ENST00000610269 501 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 RNA5SP439-201ENST00000617595 124 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AP005212.3-201ENST00000619964 528 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AL132640.3-201ENST00000630473 177 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC063952.1-203ENST00000634410 658 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 KYNUP3-201ENST00000574386 1341 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 CREM-217ENST00000439705 2306 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 BCORP1-203ENST00000513194 5093 ntBASIC4.9□□□□□ -1.63
HLA-DQA1P01909 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HLA-DQA1P01909 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AL356361.1-201ENST00000400943 1459 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 CASC19-260ENST00000641828 2001 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 MIR152-201ENST00000385212 87 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 U3.23-201ENST00000391132 200 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 NPM1P37-201ENST00000403105 874 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC109638.1-201ENST00000417406 326 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 CYCSP52-201ENST00000422857 310 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 RBMY2JP-201ENST00000425544 1059 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AL022319.1-201ENST00000458183 1167 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC093719.1-201ENST00000480427 441 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 RPL7AP30-201ENST00000482859 796 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 RN7SL182P-201ENST00000496499 300 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 RN7SL775P-201ENST00000498361 336 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC006070.1-201ENST00000508151 193 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC007537.1-201ENST00000539347 327 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 RN7SL689P-201ENST00000577215 297 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 CTSLP2-201ENST00000580501 394 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AL109924.4-201ENST00000623089 670 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AC009120.7-201ENST00000623452 780 ntBASIC4.89□□□□□ -1.63
HLA-DQA1P01909 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQA1P01909 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 DLD-205ENST00000440410 1993 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GUCY1B2-204ENST00000531898 1979 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms