Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 NPM1P36-201ENST00000415681 835 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AL929472.1-201ENST00000417484 429 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 AL589794.1-201ENST00000424971 390 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 Z68868.1-201ENST00000429048 544 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 TVP23CP1-201ENST00000450317 639 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 CCNJP1-201ENST00000450600 1149 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC236972.4-201ENST00000458091 963 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 MRPL57P6-201ENST00000506570 309 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 MRPS5P3-201ENST00000515577 166 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 IGLV3-6-201ENST00000523937 250 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC084851.2-201ENST00000530377 364 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 MIR5095-201ENST00000578844 88 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 RPL7AP69-201ENST00000595306 806 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 OR7A11P-201ENST00000597719 953 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 BUB1P1-201ENST00000603541 607 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC012175.1-201ENST00000603755 531 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC093635.1-201ENST00000609028 555 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC004241.2-201ENST00000614562 444 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 MRPL57P1-201ENST00000621486 265 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC211486.4-201ENST00000621495 113 ntBASIC5.08□□□□□ -1.6
TRBV12-3P01733 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV12-3P01733 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV12-3P01733 API5P1-201ENST00000424316 1510 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 RNU1-46P-201ENST00000384425 164 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 SNORD94-201ENST00000386037 137 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 RPL5P20-201ENST00000403848 896 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 RPEP4-201ENST00000437636 602 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC092601.1-201ENST00000444526 383 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 AP003385.3-201ENST00000472498 287 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 RPL5P14-201ENST00000494197 878 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC093870.1-201ENST00000506837 213 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 DPPA3P2-201ENST00000553589 478 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 MIR4732-201ENST00000581873 76 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AP002345.2-201ENST00000609961 904 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC068726.1-201ENST00000610993 341 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC114546.4-201ENST00000624413 369 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 AC087269.2-201ENST00000641764 975 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 UGT2B27P-201ENST00000505092 1620 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRBV12-3P01733 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.07□□□□□ -1.6
TRBV12-3P01733 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV12-3P01733 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms