Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.85□□□□□ -1.47
DUX4Q9UBX2 AL731556.1-201ENST00000394628 3711 ntBASIC5.85□□□□□ -1.47
DUX4Q9UBX2 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC020656.2-201ENST00000613291 5309 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 NPM1P14-201ENST00000343743 866 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 RNA5SP429-201ENST00000363688 109 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 RNA5SP53-201ENST00000391299 120 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 RPL9P21-201ENST00000392269 505 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL451046.1-201ENST00000406097 534 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL161742.1-201ENST00000418154 584 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 OR7E7P-201ENST00000455678 1012 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC010878.1-201ENST00000456500 1047 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 RPL34P34-201ENST00000465389 354 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC018639.1-201ENST00000492994 442 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 MRPL57P6-201ENST00000506570 309 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC139713.1-202ENST00000512366 460 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 RNA5SP75-201ENST00000516841 111 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AP004607.5-201ENST00000532034 217 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 ACTG1P15-201ENST00000570019 1063 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 MIR378H-201ENST00000579966 83 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 SNX18P10-201ENST00000625014 519 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 HSPD1P8-201ENST00000400121 1658 ntBASIC5.84□□□□□ -1.47
DUX4Q9UBX2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
DUX4Q9UBX2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
DUX4Q9UBX2 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
DUX4Q9UBX2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AC119674.1-213ENST00000641177 1386 ntBASIC5.83□□□□□ -1.48
DUX4Q9UBX2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 RNU6-1017P-201ENST00000363613 106 ntBASIC5.83□□□□□ -1.48
DUX4Q9UBX2 RN7SKP186-201ENST00000365371 303 ntBASIC5.83□□□□□ -1.48
DUX4Q9UBX2 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AL117344.1-201ENST00000407196 616 ntBASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AL139100.1-201ENST00000408001 498 ntBASIC5.83□□□□□ -1.48
DUX4Q9UBX2 RNA5SP280-201ENST00000411230 115 ntBASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.83□□□□□ -1.48
DUX4Q9UBX2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms