Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AL139254.3-201ENST00000641097 674 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 AC022819.1-201ENST00000563495 3910 ntBASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP1Q96SZ6 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC092701.1-201ENST00000623627 1551 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SKP74-201ENST00000362849 309 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 GAPDHP57-201ENST00000424400 585 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC000089.1-201ENST00000424559 801 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 DUTP4-201ENST00000424782 475 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC115285.1-201ENST00000424879 736 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AP003385.1-201ENST00000426387 893 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC092634.2-201ENST00000428146 1010 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RPS10P21-201ENST00000430654 475 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RPL7AP71-201ENST00000451120 739 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC022080.2-201ENST00000452932 533 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 NPM1P9-201ENST00000453156 844 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RPL31P11-202ENST00000454082 372 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 OR13C1P-201ENST00000457612 963 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SKP198-201ENST00000459286 306 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC096743.1-201ENST00000485172 319 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RN7SL655P-201ENST00000486087 298 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC008628.1-201ENST00000508663 265 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 IGKV2D-38-201ENST00000518423 240 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC087752.2-201ENST00000521219 281 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 LRRC34P1-201ENST00000542742 915 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 OR5BK1P-201ENST00000550421 823 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC106052.1-201ENST00000608029 497 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC097504.2-201ENST00000608088 454 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AP003399.1-201ENST00000637534 361 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC099654.15-201ENST00000639802 509 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AL513185.3-201ENST00000433335 1300 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AP002800.1-201ENST00000624982 2225 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 RAD17P2-201ENST00000451754 1977 ntBASIC7.17□□□□□ -1.26
CDK5RAP1Q96SZ6 AC016251.2-201ENST00000623393 3089 ntBASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDK5RAP1Q96SZ6 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms