Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC073365.1-203ENST00000641055 1992 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 PDCL3P5-201ENST00000398028 722 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 RN7SKP268-201ENST00000411107 316 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AL445213.1-201ENST00000412589 747 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 VN1R66P-201ENST00000412929 916 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 RPL17P17-201ENST00000419491 557 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 OR6C71P-201ENST00000432580 913 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC009518.3-201ENST00000438972 253 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 RPS19P6-201ENST00000441327 433 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 BX005266.3-201ENST00000443013 1075 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AL356133.1-201ENST00000444762 372 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 SDHCP3-201ENST00000445371 506 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC073072.2-201ENST00000447425 348 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 REG1CP-206ENST00000447469 496 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 SLAMF6P1-201ENST00000451067 602 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 RBMY2EP-202ENST00000456360 940 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 MED28P7-201ENST00000456611 530 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 RN7SL160P-201ENST00000468558 284 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC016687.1-201ENST00000482574 353 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 RN7SL849P-201ENST00000485236 295 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 RN7SL426P-201ENST00000579106 295 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 OR8G7P-201ENST00000616658 848 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 MKI67P1-201ENST00000604297 1460 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 AC068870.3-201ENST00000625077 2536 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VMP1Q96GC9 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.57□□□□□ -1.36
VMP1Q96GC9 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AC015689.2-201ENST00000528172 1738 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 CUL4AP1-201ENST00000514750 1863 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL451142.1-201ENST00000375867 775 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL451061.1-201ENST00000407887 862 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL034379.1-201ENST00000423216 253 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 PRUNEP1-201ENST00000425846 705 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL604028.2-201ENST00000437848 788 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 RPS10P14-201ENST00000440748 502 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AL133480.2-201ENST00000456723 487 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 AC079193.1-201ENST00000460497 588 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 RPL34P34-201ENST00000465389 354 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 RPL23AP8-201ENST00000479812 475 ntBASIC6.56□□□□□ -1.36
VMP1Q96GC9 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.56□□□□□ -1.36
VMP1Q96GC9 AC091544.1-201ENST00000484702 348 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms