Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.47□□□□□ -1.53
CCDC71LQ8N9Z2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC71LQ8N9Z2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC71LQ8N9Z2 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC71LQ8N9Z2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC71LQ8N9Z2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.46□□□□□ -1.53
CCDC71LQ8N9Z2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
CCDC71LQ8N9Z2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC71LQ8N9Z2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 SNORA38B-201ENST00000363524 131 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 PCNAP3-201ENST00000397222 778 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 TMA16P2-201ENST00000413187 601 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 SNRPEP5-201ENST00000425442 278 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC090954.1-201ENST00000445502 361 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 TVP23CP1-201ENST00000450317 639 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 SNX18P26-201ENST00000458433 740 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL308P-201ENST00000464971 297 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 RPSAP48-201ENST00000466509 889 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC026782.2-201ENST00000510845 636 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC117383.2-201ENST00000514722 322 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 RNA5SP318-201ENST00000516352 92 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 OR5M4P-201ENST00000529436 925 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC073916.1-201ENST00000545095 130 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC012640.3-201ENST00000607847 430 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AL136097.3-201ENST00000611097 505 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC243830.3-201ENST00000616810 376 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC087893.2-201ENST00000623272 255 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 SNORA16A-202ENST00000628458 135 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 SHQ1P1-201ENST00000437111 1544 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01616-201ENST00000561816 2280 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 GOT2P1-201ENST00000440922 1309 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 AC074141.1-201ENST00000588129 2995 ntBASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CCDC71LQ8N9Z2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AL157831.2-201ENST00000564681 3095 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 RNA5SP474-201ENST00000391234 90 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 TYMSP1-201ENST00000407851 869 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 CYCSP52-201ENST00000422857 310 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 CYP4F34P-201ENST00000425951 481 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 OR13K1P-201ENST00000444577 975 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 RN7SL182P-201ENST00000496499 300 ntBASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC71LQ8N9Z2 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms