Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 AC004241.2-201ENST00000614562 444 ntBASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 AC018558.4-201ENST00000622153 281 ntBASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 AC005753.1-201ENST00000623837 618 ntBASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC50Q8IVM0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 TRIM53CP-201ENST00000531490 1354 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AP000432.2-201ENST00000624164 2048 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 RN7SKP189-201ENST00000365042 330 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 RNU1-46P-201ENST00000384425 164 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 RN7SKP296-201ENST00000411185 341 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC091492.1-201ENST00000419844 272 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 RPS4XP19-201ENST00000460237 736 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 RPS16P9-201ENST00000477220 427 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC083906.1-201ENST00000509298 406 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 MRPL45P2-203ENST00000573318 473 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC245407.2-201ENST00000614199 451 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC005899.7-201ENST00000618199 588 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 MRPL57P3-201ENST00000619218 176 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC106782.7-201ENST00000624024 418 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AC133555.5-201ENST00000624430 418 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 AP002512.4-202ENST00000641599 4530 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 TUBBP10-201ENST00000427668 1301 ntBASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CCDC50Q8IVM0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 MIR187-201ENST00000385062 109 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 CLCN3P1-201ENST00000423965 1017 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC021876.1-201ENST00000425959 359 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 PUDPP2-201ENST00000431423 643 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC091849.1-201ENST00000509920 121 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 IGKV1D-32-201ENST00000517449 318 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 OR52K3P-201ENST00000531655 943 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC091304.4-201ENST00000565703 620 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 MIR378C-201ENST00000578683 81 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 WDR45BP1-201ENST00000583470 1029 ntBASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC50Q8IVM0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC50Q8IVM0 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms