Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC127071.2-201ENST00000623293 527 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AL035425.4-201ENST00000624509 1063 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC022507.1-201ENST00000548349 1505 ntBASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
ZNF549Q6P9A3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
ZNF549Q6P9A3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC009779.8-201ENST00000641684 4384 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 RNA5SP188-201ENST00000362916 129 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 RNA5SP355-201ENST00000365317 135 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC013470.3-201ENST00000420252 1194 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 CYCSP52-201ENST00000422857 310 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 MTND2P11-201ENST00000423638 648 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC092646.1-201ENST00000427142 901 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 RPL3P11-201ENST00000434028 1146 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AL451136.1-201ENST00000435399 325 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 GAPDHP33-201ENST00000443168 1013 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 FTH1P8-201ENST00000498161 514 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC023080.1-201ENST00000551663 931 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AP005901.4-201ENST00000577336 569 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 SNORD96A-201ENST00000606577 79 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC025171.4-201ENST00000607250 1047 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC005355.2-201ENST00000625064 484 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 AC010624.4-201ENST00000597606 1351 ntBASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZNF549Q6P9A3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC022613.3-201ENST00000560740 1346 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 HSPD1P4-201ENST00000547203 1702 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 NPM1P10-201ENST00000398310 865 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC009244.1-201ENST00000450566 258 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 RN7SL655P-201ENST00000486087 298 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms