Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYCNQ0VAF6 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYCNQ0VAF6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC4.41□□□□□ -1.7
SYCNQ0VAF6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.41□□□□□ -1.7
SYCNQ0VAF6 AC096992.2-201ENST00000609553 1684 ntBASIC4.41□□□□□ -1.7
SYCNQ0VAF6 QRSL1P3-201ENST00000552666 1316 ntBASIC4.41□□□□□ -1.7
SYCNQ0VAF6 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SYCNQ0VAF6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SYCNQ0VAF6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYCNQ0VAF6 AC139426.3-201ENST00000605648 2059 ntBASIC4.41□□□□□ -1.7
SYCNQ0VAF6 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 OR4G1P-202ENST00000641173 1788 ntBASIC4.4□□□□□ -1.7
SYCNQ0VAF6 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 RBMY1A3P-201ENST00000382670 1404 ntBASIC4.4□□□□□ -1.7
SYCNQ0VAF6 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
SYCNQ0VAF6 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 RN7SKP117-201ENST00000410175 264 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC114402.2-201ENST00000432760 643 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL590128.1-201ENST00000433407 286 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 SUMO2P8-201ENST00000434672 286 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 RPL23AP28-201ENST00000448062 470 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL929410.2-201ENST00000451170 189 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 SNORA58-201ENST00000505219 137 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC114940.1-201ENST00000512162 1265 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC073581.1-201ENST00000519036 575 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 OR4A13P-201ENST00000529316 942 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LDHC-204ENST00000536880 957 ntTSL 5 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC023310.2-201ENST00000553844 547 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL109628.1-201ENST00000556877 366 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC091932.1-201ENST00000569381 427 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC067852.5-201ENST00000589299 310 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC011921.2-201ENST00000589465 152 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 RPS27AP19-201ENST00000597285 458 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 DIMT1P1-201ENST00000603970 763 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 MIR6736-201ENST00000616799 59 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL121985.3-201ENST00000620690 523 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC103564.3-201ENST00000621194 220 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC007347.2-201ENST00000623044 180 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 PARP4P1-201ENST00000435945 2337 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AL117378.2-201ENST00000622916 1337 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 AC093844.1-201ENST00000514910 1361 ntBASIC4.4□□□□□ -1.71
SYCNQ0VAF6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYCNQ0VAF6 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 AC009120.2-204ENST00000621548 2032 ntBASIC4.39□□□□□ -1.71
SYCNQ0VAF6 AC006213.6-201ENST00000623722 4179 ntBASIC4.39□□□□□ -1.71
SYCNQ0VAF6 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCNQ0VAF6 RNA5SP429-201ENST00000363688 109 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms