Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
TPM4P67936 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM4P67936 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM4P67936 AL121839.2-201ENST00000565058 6943 ntBASIC7.27□□□□□ -1.25
TPM4P67936 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
TPM4P67936 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TPM4P67936 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM4P67936 SPATA20P1-201ENST00000423089 438 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AL357632.1-201ENST00000426688 643 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AC009237.1-201ENST00000442127 744 ntBASIC7.27□□□□□ -1.25
TPM4P67936 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TPM4P67936 RN7SL314P-201ENST00000490735 292 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM4P67936 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.27□□□□□ -1.25
TPM4P67936 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC7.27□□□□□ -1.25
TPM4P67936 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.27□□□□□ -1.25
TPM4P67936 AC007494.1-201ENST00000562293 760 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM4P67936 AC106782.7-201ENST00000624024 418 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AC018692.2-201ENST00000624130 348 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AC133555.5-201ENST00000624430 418 ntBASIC7.27□□□□□ -1.25
TPM4P67936 MIR665-201ENST00000635949 72 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AC140479.4-205ENST00000636339 820 ntBASIC7.27□□□□□ -1.25
TPM4P67936 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.27□□□□□ -1.25
TPM4P67936 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TPM4P67936 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
TPM4P67936 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.27□□□□□ -1.25
TPM4P67936 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TPM4P67936 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM4P67936 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.27□□□□□ -1.25
TPM4P67936 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TPM4P67936 AL512353.3-201ENST00000417517 1326 ntBASIC7.27□□□□□ -1.25
TPM4P67936 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
TPM4P67936 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM4P67936 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
TPM4P67936 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
TPM4P67936 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM4P67936 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
TPM4P67936 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TPM4P67936 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM4P67936 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TPM4P67936 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 RN7SKP268-201ENST00000411107 316 ntBASIC7.26□□□□□ -1.25
TPM4P67936 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM4P67936 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM4P67936 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.26□□□□□ -1.25
TPM4P67936 RN7SL390P-201ENST00000470634 284 ntBASIC7.26□□□□□ -1.25
TPM4P67936 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM4P67936 PPP1R11P1-201ENST00000486095 376 ntBASIC7.26□□□□□ -1.25
TPM4P67936 IGKV2-19-201ENST00000518132 283 ntBASIC7.26□□□□□ -1.25
TPM4P67936 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM4P67936 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM4P67936 AL445383.1-201ENST00000554689 874 ntBASIC7.26□□□□□ -1.25
TPM4P67936 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM4P67936 HNRNPCP1-201ENST00000556181 766 ntBASIC7.26□□□□□ -1.25
TPM4P67936 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM4P67936 AL132640.1-201ENST00000559594 619 ntBASIC7.26□□□□□ -1.25
TPM4P67936 FAM30C-201ENST00000561158 410 ntBASIC7.26□□□□□ -1.25
TPM4P67936 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM4P67936 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM4P67936 AC024614.1-201ENST00000577546 307 ntBASIC7.26□□□□□ -1.25
TPM4P67936 MIR1273F-201ENST00000580581 99 ntBASIC7.26□□□□□ -1.25
TPM4P67936 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM4P67936 PTCHD3P1-201ENST00000612350 537 ntBASIC7.26□□□□□ -1.25
TPM4P67936 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TPM4P67936 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM4P67936 AC011455.2-201ENST00000599320 3336 ntBASIC7.26□□□□□ -1.25
TPM4P67936 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM4P67936 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM4P67936 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
TPM4P67936 AC023245.2-201ENST00000530760 2978 ntBASIC7.26□□□□□ -1.25
TPM4P67936 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM4P67936 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.25□□□□□ -1.25
TPM4P67936 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TPM4P67936 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.25□□□□□ -1.25
TPM4P67936 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.25□□□□□ -1.25
TPM4P67936 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
TPM4P67936 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
TPM4P67936 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms