Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Z83838.1-202ENST00000456225 839 ntBASIC7.23□□□□□ -1.25
VCPP55072 AL096803.1-201ENST00000456921 1021 ntBASIC7.23□□□□□ -1.25
VCPP55072 PPP1R2P6-201ENST00000478565 588 ntBASIC7.23□□□□□ -1.25
VCPP55072 AC104109.1-201ENST00000498563 436 ntBASIC7.23□□□□□ -1.25
VCPP55072 HSD3BP3-201ENST00000514706 994 ntBASIC7.23□□□□□ -1.25
VCPP55072 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 AL845552.1-201ENST00000556820 323 ntBASIC7.23□□□□□ -1.25
VCPP55072 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.23□□□□□ -1.25
VCPP55072 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.23□□□□□ -1.25
VCPP55072 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 AC131009.3-201ENST00000621809 287 ntBASIC7.23□□□□□ -1.25
VCPP55072 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 AL049541.2-201ENST00000626377 555 ntBASIC7.23□□□□□ -1.25
VCPP55072 AP001052.1-201ENST00000626421 99 ntBASIC7.23□□□□□ -1.25
VCPP55072 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
VCPP55072 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
VCPP55072 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VCPP55072 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.23□□□□□ -1.25
VCPP55072 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.22□□□□□ -1.25
VCPP55072 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.22□□□□□ -1.25
VCPP55072 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.22□□□□□ -1.25
VCPP55072 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 AC092701.1-201ENST00000623627 1551 ntBASIC7.22□□□□□ -1.25
VCPP55072 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
VCPP55072 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
VCPP55072 RN7SKP229-201ENST00000410465 302 ntBASIC7.22□□□□□ -1.25
VCPP55072 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.22□□□□□ -1.25
VCPP55072 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.22□□□□□ -1.25
VCPP55072 GTF2IP14-201ENST00000441415 586 ntBASIC7.22□□□□□ -1.25
VCPP55072 RPL34P34-201ENST00000465389 354 ntBASIC7.22□□□□□ -1.25
VCPP55072 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.22□□□□□ -1.25
VCPP55072 AC008945.1-201ENST00000505144 499 ntBASIC7.22□□□□□ -1.25
VCPP55072 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.22□□□□□ -1.25
VCPP55072 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.22□□□□□ -1.25
VCPP55072 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.22□□□□□ -1.25
VCPP55072 AL591767.3-201ENST00000554632 525 ntBASIC7.22□□□□□ -1.25
VCPP55072 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.22□□□□□ -1.25
VCPP55072 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.22□□□□□ -1.25
VCPP55072 AC025283.1-201ENST00000572039 734 ntBASIC7.22□□□□□ -1.25
VCPP55072 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.22□□□□□ -1.25
VCPP55072 AC005229.3-201ENST00000603438 323 ntBASIC7.22□□□□□ -1.25
VCPP55072 AC026951.2-201ENST00000613847 241 ntBASIC7.22□□□□□ -1.25
VCPP55072 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.22□□□□□ -1.25
VCPP55072 MIR6886-201ENST00000619864 61 ntBASIC7.22□□□□□ -1.25
VCPP55072 AL512356.3-201ENST00000623005 461 ntBASIC7.22□□□□□ -1.25
VCPP55072 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.22□□□□□ -1.25
VCPP55072 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
VCPP55072 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
VCPP55072 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
VCPP55072 AP005139.1-201ENST00000580702 1647 ntBASIC7.22□□□□□ -1.25
VCPP55072 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
VCPP55072 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
VCPP55072 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.21□□□□□ -1.25
VCPP55072 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
VCPP55072 ATP5BP1-201ENST00000411980 1574 ntBASIC7.21□□□□□ -1.25
VCPP55072 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
VCPP55072 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
VCPP55072 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.21□□□□□ -1.25
VCPP55072 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
VCPP55072 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
VCPP55072 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.21□□□□□ -1.26
VCPP55072 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.21□□□□□ -1.26
VCPP55072 RPL36P18-201ENST00000419316 318 ntBASIC7.21□□□□□ -1.26
VCPP55072 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.21□□□□□ -1.26
VCPP55072 ETF1P1-206ENST00000427296 984 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC007679.3-201ENST00000434035 414 ntBASIC7.21□□□□□ -1.26
VCPP55072 LSM3P3-201ENST00000436601 306 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC011742.2-201ENST00000443818 352 ntBASIC7.21□□□□□ -1.26
VCPP55072 RPL7AP71-201ENST00000451120 739 ntBASIC7.21□□□□□ -1.26
VCPP55072 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 SETP20-201ENST00000457046 852 ntBASIC7.21□□□□□ -1.26
VCPP55072 BX323845.2-201ENST00000458382 234 ntBASIC7.21□□□□□ -1.26
VCPP55072 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.21□□□□□ -1.26
VCPP55072 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.21□□□□□ -1.26
VCPP55072 IGLVV-66-201ENST00000523818 341 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms