Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.4□□□□□ -1.38
CD40P25942 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.4□□□□□ -1.38
CD40P25942 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 AL139344.1-201ENST00000605228 195 ntBASIC6.4□□□□□ -1.38
CD40P25942 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 AC064807.4-201ENST00000607201 407 ntBASIC6.4□□□□□ -1.38
CD40P25942 AC116165.3-201ENST00000614524 400 ntBASIC6.4□□□□□ -1.38
CD40P25942 AC078883.4-201ENST00000623218 367 ntBASIC6.4□□□□□ -1.38
CD40P25942 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CD40P25942 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CD40P25942 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC6.4□□□□□ -1.39
CD40P25942 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CD40P25942 RBM5-AS1-201ENST00000630404 1386 ntBASIC6.4□□□□□ -1.39
CD40P25942 AC090643.1-201ENST00000623600 3100 ntBASIC6.4□□□□□ -1.39
CD40P25942 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CD40P25942 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CD40P25942 AC092111.2-201ENST00000611627 1414 ntBASIC6.4□□□□□ -1.39
CD40P25942 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CD40P25942 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CD40P25942 MAPK10-354ENST00000641823 2732 ntBASIC6.4□□□□□ -1.39
CD40P25942 AC018717.1-201ENST00000457712 1505 ntBASIC6.4□□□□□ -1.39
CD40P25942 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CD40P25942 ZNF849P-201ENST00000594711 1566 ntBASIC6.4□□□□□ -1.39
CD40P25942 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.39□□□□□ -1.39
CD40P25942 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CD40P25942 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 RNA5SP355-201ENST00000365317 135 ntBASIC6.39□□□□□ -1.39
CD40P25942 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 RNU6-1242P-201ENST00000391052 103 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC090114.1-201ENST00000393266 448 ntBASIC6.39□□□□□ -1.39
CD40P25942 ATP5HP3-201ENST00000396994 486 ntBASIC6.39□□□□□ -1.39
CD40P25942 AL021331.1-201ENST00000402817 582 ntBASIC6.39□□□□□ -1.39
CD40P25942 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 AC233289.1-201ENST00000403700 508 ntBASIC6.39□□□□□ -1.39
CD40P25942 SNORA3.1-201ENST00000408166 111 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC092638.1-201ENST00000411966 1275 ntBASIC6.39□□□□□ -1.39
CD40P25942 MTND4P3-201ENST00000417829 541 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC127537.1-201ENST00000418183 748 ntBASIC6.39□□□□□ -1.39
CD40P25942 RPA2P2-201ENST00000419698 796 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC023128.2-201ENST00000420880 1223 ntBASIC6.39□□□□□ -1.39
CD40P25942 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.39□□□□□ -1.39
CD40P25942 NAP1L4P2-201ENST00000425958 899 ntBASIC6.39□□□□□ -1.39
CD40P25942 Z83313.1-201ENST00000433780 718 ntBASIC6.39□□□□□ -1.39
CD40P25942 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 RPL5P27-201ENST00000437011 881 ntBASIC6.39□□□□□ -1.39
CD40P25942 PA2G4P6-201ENST00000438325 1197 ntBASIC6.39□□□□□ -1.39
CD40P25942 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.39□□□□□ -1.39
CD40P25942 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 AL158214.1-201ENST00000444423 404 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC023512.1-201ENST00000444513 499 ntBASIC6.39□□□□□ -1.39
CD40P25942 FTH1P7-201ENST00000450676 552 ntBASIC6.39□□□□□ -1.39
CD40P25942 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.39□□□□□ -1.39
CD40P25942 RPS20P4-201ENST00000461659 355 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC084878.1-201ENST00000480555 648 ntBASIC6.39□□□□□ -1.39
CD40P25942 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 AC025459.1-201ENST00000504072 156 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC073648.3-201ENST00000504939 925 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC008496.1-201ENST00000509131 295 ntBASIC6.39□□□□□ -1.39
CD40P25942 GCSHP1-201ENST00000512554 484 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 RNA5SP287-201ENST00000516358 103 ntBASIC6.39□□□□□ -1.39
CD40P25942 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 NDUFS5P6-201ENST00000529136 295 ntBASIC6.39□□□□□ -1.39
CD40P25942 OR8I1P-201ENST00000529291 931 ntBASIC6.39□□□□□ -1.39
CD40P25942 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.39□□□□□ -1.39
CD40P25942 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 MTND4P33-201ENST00000556706 766 ntBASIC6.39□□□□□ -1.39
CD40P25942 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 AC005070.2-201ENST00000604391 260 ntBASIC6.39□□□□□ -1.39
CD40P25942 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 AL357140.4-201ENST00000636827 412 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 408 ms