Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.37□□□□□ -1.55
CCL3L1P16619 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.37□□□□□ -1.55
CCL3L1P16619 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCL3L1P16619 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CCL3L1P16619 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCL3L1P16619 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCL3L1P16619 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CCL3L1P16619 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.37□□□□□ -1.55
CCL3L1P16619 CYP2G2P-201ENST00000594920 1485 ntBASIC5.37□□□□□ -1.55
CCL3L1P16619 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC5.37□□□□□ -1.55
CCL3L1P16619 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCL3L1P16619 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCL3L1P16619 AC062022.1-201ENST00000451026 1684 ntBASIC5.37□□□□□ -1.55
CCL3L1P16619 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.37□□□□□ -1.55
CCL3L1P16619 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCL3L1P16619 AC005332.9-201ENST00000620266 2921 ntBASIC5.37□□□□□ -1.55
CCL3L1P16619 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CCL3L1P16619 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCL3L1P16619 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 RAD17P2-201ENST00000451754 1977 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 RNA5SP512-201ENST00000364550 120 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 MRPS6P2-201ENST00000381143 370 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AC245036.1-201ENST00000391727 309 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AL023284.3-201ENST00000407767 334 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 RN7SKP221-201ENST00000410420 301 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC114324.2-202ENST00000503812 134 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC037479.1-201ENST00000558361 625 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC004805.3-201ENST00000603178 310 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AC097467.4-201ENST00000605504 141 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AC007603.3-201ENST00000636915 979 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AL121936.2-201ENST00000641935 662 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 AP002370.1-201ENST00000528055 1602 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CCL3L1P16619 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC5.36□□□□□ -1.55
CCL3L1P16619 MAPK10-357ENST00000641831 2858 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 AC022905.1-201ENST00000503430 3048 ntBASIC5.36□□□□□ -1.55
CCL3L1P16619 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCL3L1P16619 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.36□□□□□ -1.55
CCL3L1P16619 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
CCL3L1P16619 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCL3L1P16619 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.35□□□□□ -1.55
CCL3L1P16619 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.35□□□□□ -1.55
CCL3L1P16619 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCL3L1P16619 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.35□□□□□ -1.55
CCL3L1P16619 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms