Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 AL078595.2-201ENST00000605309 1780 ntBASIC5.8□□□□□ -1.48
UBCP0CG48 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBCP0CG48 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 RN7SKP77-201ENST00000363261 353 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 RNA5SP442-201ENST00000365050 107 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 AL590128.1-201ENST00000433407 286 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 AL355355.1-201ENST00000442900 793 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC126615.1-201ENST00000470084 630 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 RN7SL165P-201ENST00000477476 291 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC097460.2-201ENST00000511857 741 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 SNRPCP6-201ENST00000528310 210 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AP001646.2-201ENST00000528645 1156 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 PPIAP6-201ENST00000557078 499 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 ACTG1P22-201ENST00000603793 1099 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AL031658.2-201ENST00000616850 651 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AC069542.2-201ENST00000624816 216 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 AL121936.2-201ENST00000641935 662 ntBASIC5.79□□□□□ -1.48
UBCP0CG48 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.79□□□□□ -1.48
UBCP0CG48 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
UBCP0CG48 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.79□□□□□ -1.48
UBCP0CG48 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
UBCP0CG48 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.78□□□□□ -1.48
UBCP0CG48 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UBCP0CG48 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
UBCP0CG48 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UBCP0CG48 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
UBCP0CG48 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.78□□□□□ -1.48
UBCP0CG48 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.78□□□□□ -1.48
UBCP0CG48 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UBCP0CG48 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UBCP0CG48 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
UBCP0CG48 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
UBCP0CG48 PDCL3P5-201ENST00000398028 722 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 NPM1P31-201ENST00000399021 764 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.78□□□□□ -1.48
UBCP0CG48 NME1P1-201ENST00000420914 382 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC007568.1-201ENST00000422912 471 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.78□□□□□ -1.48
UBCP0CG48 RPL14P5-201ENST00000436474 730 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.78□□□□□ -1.48
UBCP0CG48 AL139135.2-201ENST00000445040 433 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC005517.1-201ENST00000452091 489 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.78□□□□□ -1.48
UBCP0CG48 RPSAP24-201ENST00000461543 873 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 RN7SL149P-201ENST00000465197 281 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC091849.1-201ENST00000509920 121 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.78□□□□□ -1.48
UBCP0CG48 IGKV2-19-201ENST00000518132 283 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.78□□□□□ -1.48
UBCP0CG48 GTF2IP11-201ENST00000526931 420 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AP005639.1-201ENST00000526939 192 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.78□□□□□ -1.48
UBCP0CG48 PDCL3P1-201ENST00000534575 734 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.78□□□□□ -1.48
UBCP0CG48 AF186192.2-204ENST00000581667 524 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AP006587.6-201ENST00000582128 1091 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
UBCP0CG48 BUB1P1-201ENST00000603541 607 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AL157899.1-201ENST00000604110 936 ntBASIC5.78□□□□□ -1.48
UBCP0CG48 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms