Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC114546.4-201ENST00000624413 369 ntBASIC6.83□□□□□ -1.32
RETP07949 AC018659.2-201ENST00000624690 715 ntBASIC6.83□□□□□ -1.32
RETP07949 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
RETP07949 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
RETP07949 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.83□□□□□ -1.32
RETP07949 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.83□□□□□ -1.32
RETP07949 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.83□□□□□ -1.32
RETP07949 AP000866.6-201ENST00000638898 3579 ntBASIC6.83□□□□□ -1.32
RETP07949 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RETP07949 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.82□□□□□ -1.32
RETP07949 AC009831.5-201ENST00000624000 3189 ntBASIC6.82□□□□□ -1.32
RETP07949 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RETP07949 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RETP07949 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RETP07949 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 OR7A2P-201ENST00000304105 930 ntBASIC6.82□□□□□ -1.32
RETP07949 RPL12P13-201ENST00000310055 497 ntBASIC6.82□□□□□ -1.32
RETP07949 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 RNA5SP198-201ENST00000410376 127 ntBASIC6.82□□□□□ -1.32
RETP07949 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.82□□□□□ -1.32
RETP07949 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.82□□□□□ -1.32
RETP07949 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.82□□□□□ -1.32
RETP07949 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 AC106800.2-201ENST00000514009 1103 ntBASIC6.82□□□□□ -1.32
RETP07949 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.82□□□□□ -1.32
RETP07949 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.82□□□□□ -1.32
RETP07949 AC007068.2-201ENST00000543168 395 ntBASIC6.82□□□□□ -1.32
RETP07949 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.82□□□□□ -1.32
RETP07949 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.82□□□□□ -1.32
RETP07949 AC023968.1-201ENST00000560719 475 ntBASIC6.82□□□□□ -1.32
RETP07949 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.82□□□□□ -1.32
RETP07949 AC007255.2-201ENST00000604053 631 ntBASIC6.82□□□□□ -1.32
RETP07949 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.82□□□□□ -1.32
RETP07949 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 MIR7854-201ENST00000620068 65 ntBASIC6.82□□□□□ -1.32
RETP07949 AL122023.1-201ENST00000622847 530 ntBASIC6.82□□□□□ -1.32
RETP07949 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
RETP07949 DLEU2L-201ENST00000371086 3555 ntBASIC6.82□□□□□ -1.32
RETP07949 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RETP07949 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RETP07949 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RETP07949 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
RETP07949 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.82□□□□□ -1.32
RETP07949 BRD7P1-201ENST00000557705 1915 ntBASIC6.82□□□□□ -1.32
RETP07949 AC007406.5-201ENST00000570140 3170 ntBASIC6.81□□□□□ -1.32
RETP07949 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RETP07949 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.81□□□□□ -1.32
RETP07949 BRD7P6-201ENST00000431406 1860 ntBASIC6.81□□□□□ -1.32
RETP07949 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.81□□□□□ -1.32
RETP07949 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RETP07949 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 ZNF969P-201ENST00000510345 2341 ntBASIC6.81□□□□□ -1.32
RETP07949 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.81□□□□□ -1.32
RETP07949 AL590762.1-201ENST00000391782 432 ntBASIC6.81□□□□□ -1.32
RETP07949 AL590635.1-201ENST00000406314 586 ntBASIC6.81□□□□□ -1.32
RETP07949 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 MRPS21P5-201ENST00000417885 231 ntBASIC6.81□□□□□ -1.32
RETP07949 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.81□□□□□ -1.32
RETP07949 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.81□□□□□ -1.32
RETP07949 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.81□□□□□ -1.32
RETP07949 AC092106.2-201ENST00000436597 487 ntBASIC6.81□□□□□ -1.32
RETP07949 DNAJA1P5-201ENST00000440278 943 ntBASIC6.81□□□□□ -1.32
RETP07949 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.81□□□□□ -1.32
RETP07949 SETP20-201ENST00000457046 852 ntBASIC6.81□□□□□ -1.32
RETP07949 RN7SL216P-201ENST00000471607 298 ntBASIC6.81□□□□□ -1.32
RETP07949 AC026826.1-201ENST00000493002 361 ntBASIC6.81□□□□□ -1.32
RETP07949 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.81□□□□□ -1.32
RETP07949 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.81□□□□□ -1.32
RETP07949 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.81□□□□□ -1.32
RETP07949 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.81□□□□□ -1.32
RETP07949 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.81□□□□□ -1.32
RETP07949 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.81□□□□□ -1.32
RETP07949 AL589743.6-201ENST00000611025 117 ntBASIC6.81□□□□□ -1.32
RETP07949 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.81□□□□□ -1.32
RETP07949 AC034229.6-201ENST00000623704 224 ntBASIC6.81□□□□□ -1.32
RETP07949 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RETP07949 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.81□□□□□ -1.32
RETP07949 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.81□□□□□ -1.32
RETP07949 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RETP07949 AC061975.5-201ENST00000584928 1441 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms