Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OR7A11P-201ENST00000597719 953 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 LSM1P2-201ENST00000604911 322 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 RPL12P48-201ENST00000605620 304 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 FAM74A6-203ENST00000615956 481 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 RN7SL820P-201ENST00000616437 299 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 AL354718.1-201ENST00000619764 589 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 CAP1P2-201ENST00000417455 1409 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 AC011369.2-201ENST00000624423 1567 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 AC025470.1-201ENST00000510053 2032 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 AC023632.6-201ENST00000624338 2177 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 AP005435.3-201ENST00000531260 3198 ntBASIC4.94□□□□□ -1.62
AP1S3Q96PC3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AP1S3Q96PC3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 PPIAP26-201ENST00000377951 522 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 FAUP2-201ENST00000394301 401 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 RPL31-202ENST00000409000 641 ntTSL 2 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 BX005266.3-201ENST00000443013 1075 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 OR7E102P-201ENST00000448855 1015 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 snoU13.29-201ENST00000459370 104 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 RPL34P29-201ENST00000491411 325 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 RN7SL608P-201ENST00000492377 279 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 RN7SL187P-201ENST00000495587 303 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 HNRNPA1P17-201ENST00000496620 924 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 OR5M6P-201ENST00000530227 937 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 HMGN2P47-201ENST00000559378 272 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 UBE2CP4-201ENST00000561405 535 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AP003115.1-201ENST00000569849 463 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AC005070.1-201ENST00000603744 365 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 CDY19P-201ENST00000411668 1613 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 CDY18P-201ENST00000438294 1609 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AC062029.1-202ENST00000606164 3651 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 Z97989.1-201ENST00000531702 2421 ntBASIC4.93□□□□□ -1.62
AP1S3Q96PC3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
AP1S3Q96PC3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 AC008079.2-201ENST00000623543 20396 ntBASIC4.92□□□□□ -1.62
AP1S3Q96PC3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 SAMM50P1-201ENST00000455403 1399 ntBASIC4.92□□□□□ -1.62
AP1S3Q96PC3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
AP1S3Q96PC3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms