Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 EEF1A1P3-201ENST00000417549 1385 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 MTND5P1-201ENST00000445440 1375 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL023755.1-202ENST00000636459 1665 ntTSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 CRX-207ENST00000613299 4193 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 RPLP0P2-206ENST00000496593 3525 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AL022578.1-201ENST00000439330 1433 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 Y_RNA.138-201ENST00000363462 102 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 RNU6-1090P-201ENST00000364065 94 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 IARS-201ENST00000375627 697 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 Y_RNA.419-201ENST00000384041 102 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 Y_RNA.573-201ENST00000384763 105 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 RNA5SP18-201ENST00000390935 121 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 TAF9BP1-201ENST00000396646 746 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 NCSTNP1-201ENST00000406229 144 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 U3.33-201ENST00000408117 204 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 RN7SKP119-201ENST00000410753 273 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 MTCYBP45-201ENST00000435243 565 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 LINC00328-2P-201ENST00000436585 219 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 RPL21P88-201ENST00000436649 436 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 RPL23AP76-201ENST00000441860 458 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 SLAMF6P1-201ENST00000451067 602 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC112719.1-201ENST00000477971 315 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 FTH1P4-201ENST00000480365 553 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC091133.4-201ENST00000511142 308 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC106800.2-201ENST00000514009 1103 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 IGHVII-30-1-201ENST00000522218 301 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC093027.1-201ENST00000546698 429 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC233290.2-201ENST00000552852 390 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 ULK4P2-202ENST00000564187 492 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 OR4K7P-201ENST00000580232 945 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 VN1R81P-201ENST00000602085 372 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC006006.1-201ENST00000603082 144 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 AC073091.2-201ENST00000603205 907 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 SEPT7P9-203ENST00000604116 343 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 BX323046.1-201ENST00000610145 535 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 DBIL5P2-202ENST00000491724 1692 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
LRCH3Q96II8 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 MTCO1P11-201ENST00000429111 1528 ntBASIC9.09□□□□□ -0.95
LRCH3Q96II8 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
LRCH3Q96II8 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms