Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 AC022826.1-201ENST00000519383 805 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 RPL41P2-201ENST00000544920 409 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 WDR45BP1-201ENST00000583470 1029 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 AC011447.2-201ENST00000592921 283 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 AC097504.2-201ENST00000608088 454 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 AP003485.1-201ENST00000625093 753 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 AC006453.5-201ENST00000636451 619 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 CASC19-208ENST00000641056 1292 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 CASC19-227ENST00000641411 1285 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 AC087269.2-201ENST00000641764 975 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 MTCO1P4-201ENST00000520516 1409 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RNF31Q96EP0 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 TRIM64EP-201ENST00000531233 1307 ntBASIC6.73□□□□□ -1.33
RNF31Q96EP0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF31Q96EP0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 PPIAP22-201ENST00000358455 498 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 RN7SKP254-201ENST00000410685 310 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 FTH1P5-201ENST00000425761 545 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 MTND2P2-201ENST00000434633 945 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 RPEP4-201ENST00000437636 602 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC096632.2-201ENST00000438139 1239 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AGKP1-201ENST00000455254 1263 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 RN7SL372P-201ENST00000461982 298 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC117394.1-201ENST00000477323 567 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC092902.1-201ENST00000486999 259 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC016550.1-201ENST00000505348 785 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC135626.1-201ENST00000556983 435 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 PPIAP6-201ENST00000557078 499 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AL031846.1-201ENST00000560933 314 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC137695.2-201ENST00000603123 754 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 AC005776.1-201ENST00000603164 290 ntBASIC6.72□□□□□ -1.33
RNF31Q96EP0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF31Q96EP0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF31Q96EP0 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.71□□□□□ -1.33
RNF31Q96EP0 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.71□□□□□ -1.33
RNF31Q96EP0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms