Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.88□□□□□ -1.15
SNED1Q8TER0 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNED1Q8TER0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
SNED1Q8TER0 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNED1Q8TER0 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.88□□□□□ -1.15
SNED1Q8TER0 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SNED1Q8TER0 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNED1Q8TER0 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNED1Q8TER0 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
SNED1Q8TER0 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNED1Q8TER0 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNED1Q8TER0 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.88□□□□□ -1.15
SNED1Q8TER0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.88□□□□□ -1.15
SNED1Q8TER0 AC023490.2-201ENST00000359859 470 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 RNA5SP510-201ENST00000364697 99 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AL096711.1-201ENST00000404780 554 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 RPL12P16-201ENST00000431098 498 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AC002486.2-201ENST00000447806 590 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 TPRX1P1-201ENST00000557620 319 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AL591167.1-201ENST00000607321 456 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AC018659.2-201ENST00000624690 715 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AP005139.1-201ENST00000580702 1647 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 SAGE3P-201ENST00000619800 1635 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 CASC19-205ENST00000641013 1411 ntBASIC7.87□□□□□ -1.15
SNED1Q8TER0 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNED1Q8TER0 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.87□□□□□ -1.15
SNED1Q8TER0 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 UBFD1P1-201ENST00000473259 814 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC008945.1-201ENST00000505144 499 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 OR5H7P-201ENST00000514084 930 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 Y_RNA.667-201ENST00000516212 107 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC027308.1-201ENST00000517993 110 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC122713.1-201ENST00000518368 1015 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC009237.12-201ENST00000604755 742 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC022467.1-201ENST00000614738 749 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC104447.1-201ENST00000624214 2124 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC008627.1-201ENST00000517511 1704 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNED1Q8TER0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 CYCSP52-201ENST00000422857 310 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 RPS7P14-201ENST00000426405 583 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 OR4A13P-201ENST00000529316 942 ntBASIC7.86□□□□□ -1.15
SNED1Q8TER0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.86□□□□□ -1.15
SNED1Q8TER0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms