Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.09□□□□□ -1.44
C9orf40Q8IXQ3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
C9orf40Q8IXQ3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.09□□□□□ -1.44
C9orf40Q8IXQ3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
C9orf40Q8IXQ3 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
C9orf40Q8IXQ3 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC023245.2-201ENST00000530760 2978 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 RNU1-46P-201ENST00000384425 164 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC010740.1-201ENST00000417035 684 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 GAPDHP19-201ENST00000431768 1005 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC099670.1-201ENST00000455141 783 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 RPL19P11-201ENST00000495944 589 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC004805.3-201ENST00000603178 310 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 AC015819.1-201ENST00000613588 663 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 U1.41-201ENST00000617626 165 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 API5P1-201ENST00000424316 1510 ntBASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf40Q8IXQ3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC016251.2-201ENST00000623393 3089 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 RNU1-84P-201ENST00000365447 164 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 SNORA64.3-201ENST00000365647 134 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 VIM2P-201ENST00000402383 1294 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 RPS21P8-201ENST00000413365 247 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 MRPS21P5-201ENST00000417885 231 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 OR6R1P-201ENST00000431838 940 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AL645939.3-201ENST00000435408 225 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 PMS2P9-201ENST00000441237 515 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 RPS18P1-201ENST00000447840 458 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 BZW1P1-201ENST00000454901 1240 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC004890.1-201ENST00000461005 181 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 RPL5P12-201ENST00000477071 851 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC022415.1-202ENST00000486612 523 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 LDHBP3-201ENST00000514909 822 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 IGLV3-6-201ENST00000523937 250 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AP000662.1-201ENST00000530952 487 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 BTG1P1-201ENST00000540396 508 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC037479.1-201ENST00000558361 625 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC025283.1-201ENST00000572039 734 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC133552.4-201ENST00000576103 676 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 RN7SL208P-201ENST00000577964 296 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 AC025171.4-201ENST00000607250 1047 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.07□□□□□ -1.44
C9orf40Q8IXQ3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms