Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PRNCR1-201ENST00000635449 12727 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AL359092.1-201ENST00000417156 265 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 RPL21P50-201ENST00000417698 477 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 RPS10P18-201ENST00000442662 495 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 TVP23CP1-201ENST00000450317 639 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC005726.4-201ENST00000582858 458 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC091768.1-201ENST00000609258 930 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC097641.3-201ENST00000613523 464 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AC073488.6-201ENST00000632293 754 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 AL359694.2-201ENST00000567753 1615 ntBASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SHROOM1Q2M3G4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 RPL6P21-201ENST00000418672 846 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 EIF5AP4-201ENST00000441206 465 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 NDUFA5P5-201ENST00000468361 342 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC021074.2-201ENST00000468434 172 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 RN7SL561P-201ENST00000488553 281 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC063943.2-201ENST00000495697 534 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AL356986.1-201ENST00000604085 341 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 MIR6861-201ENST00000618657 64 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 MIR7854-201ENST00000620068 65 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AP001264.1-201ENST00000620602 703 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AP001157.1-201ENST00000550837 2339 ntBASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM1Q2M3G4 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 RN7SKP237-201ENST00000364663 301 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 RN7SKP269-201ENST00000365545 319 ntBASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.65□□□□□ -1.18
SHROOM1Q2M3G4 RN7SKP281-201ENST00000410472 352 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms