Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LHX1P48742 CLNS1AP1-201ENST00000435954 682 ntBASIC6.98□□□□□ -1.29
LHX1P48742 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.98□□□□□ -1.29
LHX1P48742 AL139156.3-201ENST00000454802 394 ntBASIC6.98□□□□□ -1.29
LHX1P48742 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX1P48742 RPL5P14-201ENST00000494197 878 ntBASIC6.98□□□□□ -1.29
LHX1P48742 H3F3AP3-201ENST00000497682 407 ntBASIC6.98□□□□□ -1.29
LHX1P48742 USP9YP2-201ENST00000504503 1000 ntBASIC6.98□□□□□ -1.29
LHX1P48742 USP9YP1-201ENST00000513521 1002 ntBASIC6.98□□□□□ -1.29
LHX1P48742 IGHV3-57-201ENST00000520143 280 ntBASIC6.98□□□□□ -1.29
LHX1P48742 AC116917.1-201ENST00000520558 305 ntBASIC6.98□□□□□ -1.29
LHX1P48742 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX1P48742 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX1P48742 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX1P48742 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX1P48742 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
LHX1P48742 RPL41P2-201ENST00000544920 409 ntBASIC6.98□□□□□ -1.29
LHX1P48742 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX1P48742 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX1P48742 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX1P48742 AC133552.4-201ENST00000576103 676 ntBASIC6.98□□□□□ -1.29
LHX1P48742 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LHX1P48742 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX1P48742 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.98□□□□□ -1.29
LHX1P48742 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX1P48742 BUB1P1-201ENST00000603541 607 ntBASIC6.98□□□□□ -1.29
LHX1P48742 AL445647.2-201ENST00000615170 130 ntBASIC6.98□□□□□ -1.29
LHX1P48742 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX1P48742 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX1P48742 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 AC023245.2-201ENST00000530760 2978 ntBASIC6.98□□□□□ -1.29
LHX1P48742 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LHX1P48742 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
LHX1P48742 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LHX1P48742 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 RNA5SP485-201ENST00000365053 119 ntBASIC6.97□□□□□ -1.29
LHX1P48742 RNU1-46P-201ENST00000384425 164 ntBASIC6.97□□□□□ -1.29
LHX1P48742 AL139184.1-202ENST00000422303 222 ntBASIC6.97□□□□□ -1.29
LHX1P48742 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 LINC00328-2P-201ENST00000436585 219 ntBASIC6.97□□□□□ -1.29
LHX1P48742 AC007383.1-201ENST00000445875 636 ntBASIC6.97□□□□□ -1.29
LHX1P48742 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX1P48742 AC063943.2-201ENST00000495697 534 ntBASIC6.97□□□□□ -1.29
LHX1P48742 AP003033.2-201ENST00000528901 805 ntBASIC6.97□□□□□ -1.29
LHX1P48742 OR4A13P-201ENST00000529316 942 ntBASIC6.97□□□□□ -1.29
LHX1P48742 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.97□□□□□ -1.29
LHX1P48742 AC023968.1-201ENST00000560719 475 ntBASIC6.97□□□□□ -1.29
LHX1P48742 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.97□□□□□ -1.29
LHX1P48742 AC012368.3-201ENST00000604190 219 ntBASIC6.97□□□□□ -1.29
LHX1P48742 AL034374.2-201ENST00000605281 548 ntBASIC6.97□□□□□ -1.29
LHX1P48742 AC019257.2-201ENST00000605539 497 ntBASIC6.97□□□□□ -1.29
LHX1P48742 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.97□□□□□ -1.29
LHX1P48742 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.97□□□□□ -1.29
LHX1P48742 MIR6085-201ENST00000618314 110 ntBASIC6.97□□□□□ -1.29
LHX1P48742 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 AC012653.2-201ENST00000621880 420 ntBASIC6.97□□□□□ -1.29
LHX1P48742 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.97□□□□□ -1.29
LHX1P48742 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX1P48742 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX1P48742 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.97□□□□□ -1.29
LHX1P48742 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
LHX1P48742 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.97□□□□□ -1.29
LHX1P48742 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX1P48742 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.97□□□□□ -1.29
LHX1P48742 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.96□□□□□ -1.29
LHX1P48742 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.96□□□□□ -1.29
LHX1P48742 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
LHX1P48742 API5P1-201ENST00000424316 1510 ntBASIC6.96□□□□□ -1.29
LHX1P48742 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
LHX1P48742 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.96□□□□□ -1.29
LHX1P48742 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LHX1P48742 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LHX1P48742 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LHX1P48742 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LHX1P48742 AL359195.2-201ENST00000623657 4412 ntBASIC6.96□□□□□ -1.3
LHX1P48742 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms