Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 AC092718.7-201ENST00000623577 1776 ntBASIC8.35□□□□□ -1.07
VARSP26640 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 AL365475.1-201ENST00000565135 1949 ntBASIC8.35□□□□□ -1.07
VARSP26640 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 AL353743.4-201ENST00000422653 1547 ntBASIC8.34□□□□□ -1.07
VARSP26640 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 SNORA58.1-201ENST00000364133 136 ntBASIC8.34□□□□□ -1.07
VARSP26640 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 RPL31P1-201ENST00000398116 372 ntBASIC8.34□□□□□ -1.07
VARSP26640 RN7SKP154-201ENST00000410136 290 ntBASIC8.34□□□□□ -1.07
VARSP26640 RN7SKP152-201ENST00000410444 315 ntBASIC8.34□□□□□ -1.07
VARSP26640 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 TAF13P2-201ENST00000416876 286 ntBASIC8.34□□□□□ -1.07
VARSP26640 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 MTND1P28-201ENST00000435623 950 ntBASIC8.34□□□□□ -1.07
VARSP26640 WBP1LP7-201ENST00000437905 363 ntBASIC8.34□□□□□ -1.07
VARSP26640 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 AL590609.1-201ENST00000442164 328 ntBASIC8.34□□□□□ -1.07
VARSP26640 AC093019.1-201ENST00000443135 252 ntBASIC8.34□□□□□ -1.07
VARSP26640 MTND6P21-201ENST00000443620 482 ntBASIC8.34□□□□□ -1.07
VARSP26640 AC013399.1-201ENST00000450311 418 ntBASIC8.34□□□□□ -1.07
VARSP26640 BX322784.1-201ENST00000455793 1077 ntBASIC8.34□□□□□ -1.07
VARSP26640 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 RPL5P29-201ENST00000482972 894 ntBASIC8.34□□□□□ -1.07
VARSP26640 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 WBP1LP4-201ENST00000505043 344 ntBASIC8.34□□□□□ -1.07
VARSP26640 AC083906.4-201ENST00000514634 987 ntBASIC8.34□□□□□ -1.07
VARSP26640 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC8.34□□□□□ -1.07
VARSP26640 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC8.34□□□□□ -1.07
VARSP26640 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.34□□□□□ -1.07
VARSP26640 AC006960.3-201ENST00000561845 705 ntBASIC8.34□□□□□ -1.07
VARSP26640 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 FRG2HP-201ENST00000568807 832 ntBASIC8.34□□□□□ -1.07
VARSP26640 AL391840.1-201ENST00000571144 367 ntBASIC8.34□□□□□ -1.07
VARSP26640 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 DUXAP4-201ENST00000603046 613 ntBASIC8.34□□□□□ -1.07
VARSP26640 AL021368.3-201ENST00000607119 578 ntBASIC8.34□□□□□ -1.07
VARSP26640 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC8.34□□□□□ -1.07
VARSP26640 AC135507.2-201ENST00000612443 309 ntBASIC8.34□□□□□ -1.07
VARSP26640 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 AC002550.2-201ENST00000621246 394 ntBASIC8.34□□□□□ -1.07
VARSP26640 ALG13-226ENST00000622986 582 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
VARSP26640 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.34□□□□□ -1.07
VARSP26640 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VARSP26640 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
VARSP26640 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
VARSP26640 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
VARSP26640 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.08
VARSP26640 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
VARSP26640 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC8.34□□□□□ -1.08
VARSP26640 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.08
VARSP26640 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.08
VARSP26640 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.34□□□□□ -1.08
VARSP26640 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 AC108463.3-201ENST00000603748 1482 ntBASIC8.33□□□□□ -1.08
VARSP26640 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.33□□□□□ -1.08
VARSP26640 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARSP26640 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms