Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC013701.1-201ENST00000522657 465 ntBASIC6.41□□□□□ -1.38
CD40P25942 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.41□□□□□ -1.38
CD40P25942 OSBPL9P5-201ENST00000542581 171 ntBASIC6.41□□□□□ -1.38
CD40P25942 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.41□□□□□ -1.38
CD40P25942 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.41□□□□□ -1.38
CD40P25942 AC087897.1-201ENST00000550134 156 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC011611.5-201ENST00000552477 578 ntBASIC6.41□□□□□ -1.38
CD40P25942 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.41□□□□□ -1.38
CD40P25942 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.41□□□□□ -1.38
CD40P25942 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.41□□□□□ -1.38
CD40P25942 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.41□□□□□ -1.38
CD40P25942 AC007346.2-201ENST00000564816 892 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC105275.2-201ENST00000567907 711 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC007346.1-201ENST00000569208 867 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.41□□□□□ -1.38
CD40P25942 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.41□□□□□ -1.38
CD40P25942 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.41□□□□□ -1.38
CD40P25942 AC061975.3-201ENST00000583209 244 ntBASIC6.41□□□□□ -1.38
CD40P25942 AP001554.1-201ENST00000604533 376 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC024060.1-201ENST00000607052 494 ntBASIC6.41□□□□□ -1.38
CD40P25942 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.41□□□□□ -1.38
CD40P25942 AC096708.4-201ENST00000620563 552 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC103564.3-201ENST00000621194 220 ntBASIC6.41□□□□□ -1.38
CD40P25942 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.41□□□□□ -1.38
CD40P25942 uc_338.21-201ENST00000622458 147 ntBASIC6.41□□□□□ -1.38
CD40P25942 RPL23AP61-201ENST00000623642 466 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.41□□□□□ -1.38
CD40P25942 AC090897.3-201ENST00000636973 1157 ntBASIC6.41□□□□□ -1.38
CD40P25942 AC119674.1-201ENST00000641611 1210 ntBASIC6.41□□□□□ -1.38
CD40P25942 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CD40P25942 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.41□□□□□ -1.38
CD40P25942 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.41□□□□□ -1.38
CD40P25942 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 AC068860.1-201ENST00000623701 3736 ntBASIC6.41□□□□□ -1.38
CD40P25942 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.41□□□□□ -1.38
CD40P25942 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.41□□□□□ -1.38
CD40P25942 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.41□□□□□ -1.38
CD40P25942 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CD40P25942 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
CD40P25942 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.41□□□□□ -1.38
CD40P25942 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD40P25942 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CD40P25942 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CD40P25942 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 AC112255.1-201ENST00000624070 2493 ntBASIC6.4□□□□□ -1.38
CD40P25942 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 AP000641.1-201ENST00000531988 1639 ntBASIC6.4□□□□□ -1.38
CD40P25942 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CD40P25942 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CD40P25942 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CD40P25942 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 AC119751.3-201ENST00000399720 670 ntBASIC6.4□□□□□ -1.38
CD40P25942 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 SLC20A1P1-201ENST00000413906 956 ntBASIC6.4□□□□□ -1.38
CD40P25942 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 RAC1P4-201ENST00000419413 579 ntBASIC6.4□□□□□ -1.38
CD40P25942 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CD40P25942 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.4□□□□□ -1.38
CD40P25942 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 EIF3LP2-201ENST00000457262 807 ntBASIC6.4□□□□□ -1.38
CD40P25942 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.4□□□□□ -1.38
CD40P25942 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.4□□□□□ -1.38
CD40P25942 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 RPL12P7-201ENST00000493832 494 ntBASIC6.4□□□□□ -1.38
CD40P25942 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.4□□□□□ -1.38
CD40P25942 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.4□□□□□ -1.38
CD40P25942 MTCYBP19-201ENST00000517463 1124 ntBASIC6.4□□□□□ -1.38
CD40P25942 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.4□□□□□ -1.38
CD40P25942 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.4□□□□□ -1.38
CD40P25942 OR4C1P-201ENST00000530880 937 ntBASIC6.4□□□□□ -1.38
CD40P25942 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.4□□□□□ -1.38
CD40P25942 AC007834.2-201ENST00000536310 343 ntBASIC6.4□□□□□ -1.38
CD40P25942 NF1P12-201ENST00000549593 583 ntBASIC6.4□□□□□ -1.38
CD40P25942 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms