Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 BIN2P1-201ENST00000504996 1530 ntBASIC6.13□□□□□ -1.43
NCK1P16333 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.13□□□□□ -1.43
NCK1P16333 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
NCK1P16333 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCK1P16333 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCK1P16333 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCK1P16333 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCK1P16333 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCK1P16333 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NCK1P16333 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NCK1P16333 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NCK1P16333 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NCK1P16333 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 AC023886.2-201ENST00000321285 411 ntBASIC6.12□□□□□ -1.43
NCK1P16333 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
NCK1P16333 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.12□□□□□ -1.43
NCK1P16333 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.12□□□□□ -1.43
NCK1P16333 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NCK1P16333 SNORA70.9-201ENST00000384370 135 ntBASIC6.12□□□□□ -1.43
NCK1P16333 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 RPSAP44-201ENST00000406712 884 ntBASIC6.12□□□□□ -1.43
NCK1P16333 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
NCK1P16333 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.12□□□□□ -1.43
NCK1P16333 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.12□□□□□ -1.43
NCK1P16333 RPL23AP18-201ENST00000416139 468 ntBASIC6.12□□□□□ -1.43
NCK1P16333 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.12□□□□□ -1.43
NCK1P16333 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.12□□□□□ -1.43
NCK1P16333 VN1R38P-201ENST00000450265 887 ntBASIC6.12□□□□□ -1.43
NCK1P16333 RPL7AP71-201ENST00000451120 739 ntBASIC6.12□□□□□ -1.43
NCK1P16333 SCDP1-201ENST00000455244 1081 ntBASIC6.12□□□□□ -1.43
NCK1P16333 RN7SL145P-201ENST00000469955 296 ntBASIC6.12□□□□□ -1.43
NCK1P16333 RN7SL390P-201ENST00000470634 284 ntBASIC6.12□□□□□ -1.43
NCK1P16333 AC018475.1-201ENST00000478358 465 ntBASIC6.12□□□□□ -1.43
NCK1P16333 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.12□□□□□ -1.43
NCK1P16333 AC091965.3-201ENST00000506236 208 ntBASIC6.12□□□□□ -1.43
NCK1P16333 AC026774.2-201ENST00000513990 1098 ntBASIC6.12□□□□□ -1.43
NCK1P16333 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
NCK1P16333 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.12□□□□□ -1.43
NCK1P16333 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC6.12□□□□□ -1.43
NCK1P16333 NATP-201ENST00000523491 878 ntBASIC6.12□□□□□ -1.43
NCK1P16333 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.12□□□□□ -1.43
NCK1P16333 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.12□□□□□ -1.43
NCK1P16333 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 AL132640.1-201ENST00000559594 619 ntBASIC6.12□□□□□ -1.43
NCK1P16333 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.12□□□□□ -1.43
NCK1P16333 AC233702.7-202ENST00000582941 211 ntBASIC6.12□□□□□ -1.43
NCK1P16333 MIR3159-201ENST00000584572 74 ntBASIC6.12□□□□□ -1.43
NCK1P16333 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.12□□□□□ -1.43
NCK1P16333 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.12□□□□□ -1.43
NCK1P16333 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.12□□□□□ -1.43
NCK1P16333 AC012510.1-201ENST00000607946 759 ntBASIC6.12□□□□□ -1.43
NCK1P16333 AL445649.1-201ENST00000615941 691 ntBASIC6.12□□□□□ -1.43
NCK1P16333 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.12□□□□□ -1.43
NCK1P16333 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 TTC41P-205ENST00000551270 3963 ntBASIC6.12□□□□□ -1.43
NCK1P16333 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NCK1P16333 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.11□□□□□ -1.43
NCK1P16333 AL669831.5-218ENST00000591702 1873 ntBASIC6.11□□□□□ -1.43
NCK1P16333 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 AC078880.4-201ENST00000617627 1749 ntBASIC6.11□□□□□ -1.43
NCK1P16333 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.11□□□□□ -1.43
NCK1P16333 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCK1P16333 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 AC099654.3-201ENST00000447087 1546 ntBASIC6.11□□□□□ -1.43
NCK1P16333 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 TRIM53CP-201ENST00000531490 1354 ntBASIC6.11□□□□□ -1.43
NCK1P16333 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NCK1P16333 KYNUP2-201ENST00000582280 1329 ntBASIC6.11□□□□□ -1.43
NCK1P16333 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCK1P16333 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NCK1P16333 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCK1P16333 RNA5SP176-201ENST00000390956 110 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms