Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC011921.2-201ENST00000589465 152 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AC092944.2-201ENST00000605443 889 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 OR1N1-202ENST00000619659 939 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AL354718.1-201ENST00000619764 589 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AC020923.1-201ENST00000624021 917 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.04□□□□□ -1.44
ZIC3O60481 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ZIC3O60481 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.04□□□□□ -1.44
ZIC3O60481 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
ZIC3O60481 AC122713.2-201ENST00000624942 3335 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
ZIC3O60481 NEK2P4-201ENST00000425793 1329 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 PSMC1P4-201ENST00000515236 1327 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 AL512310.3-201ENST00000547023 1335 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 RBPJP6-201ENST00000411556 1431 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ZIC3O60481 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 OR7E25P-201ENST00000344844 931 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 SNORA38B-201ENST00000363524 131 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ZIC3O60481 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ZIC3O60481 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 AC128677.1-201ENST00000436016 442 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 RPEP4-201ENST00000437636 602 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.03□□□□□ -1.44
ZIC3O60481 UBBP5-201ENST00000446970 266 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.03□□□□□ -1.44
ZIC3O60481 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.03□□□□□ -1.44
ZIC3O60481 HNRNPRP2-201ENST00000528421 743 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 OR9G2P-201ENST00000533326 880 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.03□□□□□ -1.44
ZIC3O60481 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.03□□□□□ -1.44
ZIC3O60481 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 AC114477.1-201ENST00000605097 605 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.03□□□□□ -1.44
ZIC3O60481 MIR6503-201ENST00000622884 86 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 AL034408.1-201ENST00000637712 664 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.03□□□□□ -1.44
ZIC3O60481 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 AC092821.2-201ENST00000545710 2042 ntBASIC6.03□□□□□ -1.44
ZIC3O60481 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ZIC3O60481 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.03□□□□□ -1.44
ZIC3O60481 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.02□□□□□ -1.45
ZIC3O60481 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZIC3O60481 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZIC3O60481 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZIC3O60481 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZIC3O60481 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
ZIC3O60481 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZIC3O60481 AC007485.2-201ENST00000623493 1667 ntBASIC6.02□□□□□ -1.45
ZIC3O60481 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
ZIC3O60481 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZIC3O60481 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ZIC3O60481 RNA5SP85-201ENST00000365378 119 ntBASIC6.02□□□□□ -1.45
ZIC3O60481 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms