Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC017035.1-201ENST00000411999 1115 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 SNORA58-201ENST00000505219 137 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC114781.3-201ENST00000512083 142 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC009120.3-201ENST00000563335 499 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 TATDN2P3-201ENST00000452855 3665 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 RN7SKP78-201ENST00000364711 318 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AL096711.1-201ENST00000404780 554 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 ZNF619P1-201ENST00000446539 752 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC110749.1-201ENST00000462007 357 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC023194.2-201ENST00000465398 406 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC022206.1-201ENST00000495947 347 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC095057.1-201ENST00000507583 168 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 LDHAP1-201ENST00000509421 992 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 RNA5SP434-201ENST00000516647 121 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC090826.1-203ENST00000569235 490 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 SNORD91A-202ENST00000609620 191 ntBASIC8.22□□□□□ -1.09
SCN11AQ9UI33 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.22□□□□□ -1.09
SCN11AQ9UI33 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.21□□□□□ -1.09
SCN11AQ9UI33 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCN11AQ9UI33 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.21□□□□□ -1.09
SCN11AQ9UI33 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SCN11AQ9UI33 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SCN11AQ9UI33 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SCN11AQ9UI33 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
SCN11AQ9UI33 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SCN11AQ9UI33 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 RNU1-49P-201ENST00000363468 159 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 SNORA17A-201ENST00000391185 133 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 IPPKP1-201ENST00000422501 768 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 CHEK2P5-201ENST00000423877 246 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 RPL23AP19-201ENST00000436229 369 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 AC005077.1-201ENST00000449226 375 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 AC027229.1-201ENST00000583887 253 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 AL008723.3-201ENST00000608926 449 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 SNORA17.5-201ENST00000630429 132 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 AC093225.1-201ENST00000506867 1408 ntBASIC8.21□□□□□ -1.1
SCN11AQ9UI33 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.21□□□□□ -1.1
SCN11AQ9UI33 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 RANP2-201ENST00000456833 229 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 CST12P-201ENST00000457644 362 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC006499.4-201ENST00000510947 694 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC068305.2-201ENST00000550567 1205 ntBASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SCN11AQ9UI33 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms