Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 OR7E83P-201ENST00000511021 970 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC026700.1-201ENST00000512074 544 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 OR5AK1P-201ENST00000524837 922 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.66□□□□□ -1.02
HLA-CQ95604 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC091834.1-201ENST00000614543 472 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC124864.2-201ENST00000624736 186 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-CQ95604 AL139254.2-202ENST00000641937 1156 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
HLA-CQ95604 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 AC109347.1-201ENST00000562919 2036 ntBASIC8.66□□□□□ -1.02
HLA-CQ95604 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 ARHGAP25-209ENST00000479844 1933 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HLA-CQ95604 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-CQ95604 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC8.65□□□□□ -1.02
HLA-CQ95604 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC092111.2-201ENST00000611627 1414 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 LINC00886-201ENST00000472943 3306 ntTSL 2 BASIC8.65□□□□□ -1.02
HLA-CQ95604 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 AL590004.1-201ENST00000405321 300 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.65□□□□□ -1.02
HLA-CQ95604 RPL21P111-201ENST00000418453 477 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 FAM96AP1-201ENST00000430879 482 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC007677.1-201ENST00000445757 515 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AL157827.1-201ENST00000447622 132 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC8.65□□□□□ -1.02
HLA-CQ95604 RBMY3AP-201ENST00000449381 1145 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 RPL4P1-201ENST00000496596 1278 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC097173.1-201ENST00000505862 819 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.65□□□□□ -1.02
HLA-CQ95604 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC092133.1-201ENST00000565828 719 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 ATP5F1P7-201ENST00000567330 760 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 RN7SL131P-201ENST00000579043 256 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.65□□□□□ -1.02
HLA-CQ95604 AC022400.4-201ENST00000604613 286 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AP000238.1-201ENST00000608759 426 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AC138649.3-201ENST00000622154 254 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 AP003068.4-201ENST00000623192 802 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HLA-CQ95604 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 AF228730.7-203ENST00000641436 1804 ntBASIC8.65□□□□□ -1.02
HLA-CQ95604 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-CQ95604 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
HLA-CQ95604 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.65□□□□□ -1.03
HLA-CQ95604 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
HLA-CQ95604 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.65□□□□□ -1.03
HLA-CQ95604 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC8.65□□□□□ -1.03
HLA-CQ95604 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC8.65□□□□□ -1.03
HLA-CQ95604 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
HLA-CQ95604 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.03
HLA-CQ95604 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
HLA-CQ95604 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
HLA-CQ95604 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HLA-CQ95604 AC025031.5-201ENST00000623851 2523 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms