Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC017037.4-201ENST00000624526 826 ntBASIC7□□□□□ -1.29
CCDC50Q8IVM0 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC7□□□□□ -1.29
CCDC50Q8IVM0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CCDC50Q8IVM0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CCDC50Q8IVM0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7□□□□□ -1.29
CCDC50Q8IVM0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7□□□□□ -1.29
CCDC50Q8IVM0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CCDC50Q8IVM0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7□□□□□ -1.29
CCDC50Q8IVM0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CCDC50Q8IVM0 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
CCDC50Q8IVM0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCDC50Q8IVM0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7□□□□□ -1.29
CCDC50Q8IVM0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CCDC50Q8IVM0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 STAG3L4-201ENST00000352103 530 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AL451046.1-201ENST00000406097 534 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AL049697.3-201ENST00000406493 982 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 GRPEL2P2-201ENST00000421856 670 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AC027124.1-201ENST00000440852 466 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 RN7SL492P-201ENST00000460700 295 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 RN7SL149P-201ENST00000465197 281 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AC025271.1-201ENST00000485045 429 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AC021146.11-201ENST00000503319 491 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 IGHV3-57-201ENST00000520143 280 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 PHBP2-201ENST00000532859 806 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 MIR4800-201ENST00000537353 80 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AL132640.1-201ENST00000559594 619 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 RN7SL270P-201ENST00000579643 281 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AC004836.1-201ENST00000623032 634 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 ZNF806-201ENST00000438300 1774 ntBASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.99□□□□□ -1.29
CCDC50Q8IVM0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AL731556.1-201ENST00000394628 3711 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 RNA5SP176-201ENST00000390956 110 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 SNORA11D-201ENST00000408548 128 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 SNORA11E-201ENST00000408778 128 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 RPS7P12-201ENST00000422385 582 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AL139415.1-201ENST00000424862 352 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 OR7E7P-201ENST00000455678 1012 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 RN7SL390P-201ENST00000470634 284 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 IGKV2D-38-201ENST00000518423 240 ntBASIC6.98□□□□□ -1.29
CCDC50Q8IVM0 PSMC1P8-201ENST00000536820 1296 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms