Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 LARP1P1-201ENST00000407692 292 ntBASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AC245884.2-201ENST00000426257 404 ntBASIC6.41□□□□□ -1.38
RIF1Q5UIP0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 SPRYD7P1-201ENST00000443861 570 ntBASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.41□□□□□ -1.38
RIF1Q5UIP0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 KARSP2-201ENST00000415696 1639 ntBASIC6.41□□□□□ -1.38
RIF1Q5UIP0 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RIF1Q5UIP0 MARK2P4-201ENST00000503381 2380 ntBASIC6.41□□□□□ -1.38
RIF1Q5UIP0 AL359263.1-201ENST00000441188 2796 ntBASIC6.4□□□□□ -1.38
RIF1Q5UIP0 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 AC104964.2-201ENST00000562242 4641 ntBASIC6.4□□□□□ -1.38
RIF1Q5UIP0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 AL354794.2-201ENST00000424795 1248 ntBASIC6.4□□□□□ -1.38
RIF1Q5UIP0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 HIGD1AP5-201ENST00000529959 259 ntBASIC6.4□□□□□ -1.38
RIF1Q5UIP0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 MRPS21P8-201ENST00000569196 235 ntBASIC6.4□□□□□ -1.38
RIF1Q5UIP0 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 AC073333.2-201ENST00000603589 769 ntBASIC6.4□□□□□ -1.38
RIF1Q5UIP0 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 TARS-202ENST00000455217 2523 ntTSL 2 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
RIF1Q5UIP0 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 RN7SKP47-201ENST00000365347 328 ntBASIC6.4□□□□□ -1.39
RIF1Q5UIP0 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 RPL37P18-201ENST00000411602 243 ntBASIC6.4□□□□□ -1.39
RIF1Q5UIP0 RAC1P4-201ENST00000419413 579 ntBASIC6.4□□□□□ -1.39
RIF1Q5UIP0 NUCKS1P1-201ENST00000452067 703 ntBASIC6.4□□□□□ -1.39
RIF1Q5UIP0 YWHAEP1-201ENST00000453697 763 ntBASIC6.4□□□□□ -1.39
RIF1Q5UIP0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 CASC19-208ENST00000641056 1292 ntBASIC6.4□□□□□ -1.39
RIF1Q5UIP0 CASC19-227ENST00000641411 1285 ntBASIC6.4□□□□□ -1.39
RIF1Q5UIP0 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RIF1Q5UIP0 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 OR52B3P-201ENST00000314715 928 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 RAB28P1-201ENST00000411517 641 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AL133351.3-201ENST00000454998 193 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 RNA5SP92-201ENST00000516437 110 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms