Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.09□□□□□ -1.27
YBX1P67809 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.09□□□□□ -1.27
YBX1P67809 AC026124.2-201ENST00000621847 656 ntBASIC7.09□□□□□ -1.27
YBX1P67809 AC098679.5-201ENST00000624394 571 ntBASIC7.09□□□□□ -1.27
YBX1P67809 CASC19-212ENST00000641153 1287 ntBASIC7.09□□□□□ -1.27
YBX1P67809 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.09□□□□□ -1.27
YBX1P67809 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.09□□□□□ -1.27
YBX1P67809 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
YBX1P67809 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.09□□□□□ -1.27
YBX1P67809 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
YBX1P67809 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
YBX1P67809 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
YBX1P67809 MAPK10-383ENST00000642032 3390 ntBASIC7.09□□□□□ -1.27
YBX1P67809 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
YBX1P67809 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
YBX1P67809 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
YBX1P67809 WNK1-220ENST00000574564 1401 ntBASIC7.09□□□□□ -1.28
YBX1P67809 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
YBX1P67809 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
YBX1P67809 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
YBX1P67809 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
YBX1P67809 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
YBX1P67809 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 OR4C1P-202ENST00000641065 1569 ntBASIC7.08□□□□□ -1.28
YBX1P67809 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
YBX1P67809 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
YBX1P67809 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
YBX1P67809 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
YBX1P67809 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
YBX1P67809 RNU6-192P-201ENST00000391253 100 ntBASIC7.08□□□□□ -1.28
YBX1P67809 NPM1P37-201ENST00000403105 874 ntBASIC7.08□□□□□ -1.28
YBX1P67809 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 AC244452.1-201ENST00000413798 141 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 TRGV6-201ENST00000417928 299 ntBASIC7.08□□□□□ -1.28
YBX1P67809 NIP7P1-201ENST00000433227 512 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 FUNDC2P2-202ENST00000443452 493 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AC006326.1-201ENST00000445465 787 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AC092421.1-201ENST00000448148 418 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 AC234771.3-201ENST00000454984 622 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 TPT1P1-201ENST00000458495 518 ntBASIC7.08□□□□□ -1.28
YBX1P67809 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 CHCHD2P7-201ENST00000508008 452 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 AC021146.10-201ENST00000515628 706 ntBASIC7.08□□□□□ -1.28
YBX1P67809 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.08□□□□□ -1.28
YBX1P67809 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.08□□□□□ -1.28
YBX1P67809 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 AC006116.6-201ENST00000593258 1103 ntBASIC7.08□□□□□ -1.28
YBX1P67809 OR7A8P-201ENST00000595427 913 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AL139407.1-201ENST00000613826 1175 ntBASIC7.08□□□□□ -1.28
YBX1P67809 AC104985.3-201ENST00000623479 597 ntBASIC7.08□□□□□ -1.28
YBX1P67809 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
YBX1P67809 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.08□□□□□ -1.28
YBX1P67809 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 RNF19BPY-201ENST00000458209 1550 ntBASIC7.08□□□□□ -1.28
YBX1P67809 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
YBX1P67809 AC009501.3-201ENST00000605001 1352 ntBASIC7.08□□□□□ -1.28
YBX1P67809 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms