Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC026826.3-201ENST00000561747 158 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC5.44□□□□□ -1.54
LMO4P61968 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 AL499605.1-201ENST00000604628 403 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 AL355974.1-201ENST00000618896 1708 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AL354718.1-201ENST00000619764 589 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC010809.3-201ENST00000621310 641 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC073592.6-201ENST00000624271 415 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
LMO4P61968 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 MTCO1P25-201ENST00000414449 1799 ntBASIC5.44□□□□□ -1.54
LMO4P61968 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC5.43□□□□□ -1.54
LMO4P61968 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 ENO1P4-201ENST00000416471 1785 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AP003486.1-201ENST00000525716 3994 ntBASIC5.43□□□□□ -1.54
LMO4P61968 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 OR2L9P-201ENST00000444456 913 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AC002486.2-201ENST00000447806 590 ntBASIC5.43□□□□□ -1.54
LMO4P61968 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 SEPT14P1-201ENST00000458703 648 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 AC131392.1-201ENST00000506490 633 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 AC011853.1-201ENST00000518911 454 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 AC092375.1-201ENST00000550410 637 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 AL078601.3-201ENST00000573303 535 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 AC134669.1-201ENST00000581275 672 ntBASIC5.43□□□□□ -1.54
LMO4P61968 AC074141.1-201ENST00000588129 2995 ntBASIC5.43□□□□□ -1.54
LMO4P61968 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.43□□□□□ -1.54
LMO4P61968 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LMO4P61968 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LMO4P61968 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.43□□□□□ -1.54
LMO4P61968 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.43□□□□□ -1.54
LMO4P61968 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC5.43□□□□□ -1.54
LMO4P61968 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMO4P61968 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
LMO4P61968 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 TATDN2P3-201ENST00000452855 3665 ntBASIC5.42□□□□□ -1.54
LMO4P61968 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.42□□□□□ -1.54
LMO4P61968 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMO4P61968 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms