Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7□□□□□ -1.29
LHX1P48742 RN7SKP221-201ENST00000410420 301 ntBASIC7□□□□□ -1.29
LHX1P48742 AL713922.1-201ENST00000416477 747 ntBASIC7□□□□□ -1.29
LHX1P48742 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7□□□□□ -1.29
LHX1P48742 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7□□□□□ -1.29
LHX1P48742 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7□□□□□ -1.29
LHX1P48742 AC098818.1-201ENST00000478593 252 ntBASIC7□□□□□ -1.29
LHX1P48742 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7□□□□□ -1.29
LHX1P48742 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7□□□□□ -1.29
LHX1P48742 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7□□□□□ -1.29
LHX1P48742 AP001000.1-201ENST00000526843 742 ntBASIC7□□□□□ -1.29
LHX1P48742 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7□□□□□ -1.29
LHX1P48742 AC015818.6-201ENST00000584274 634 ntBASIC7□□□□□ -1.29
LHX1P48742 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7□□□□□ -1.29
LHX1P48742 AC004805.3-201ENST00000603178 310 ntBASIC7□□□□□ -1.29
LHX1P48742 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7□□□□□ -1.29
LHX1P48742 MIR6889-201ENST00000613185 59 ntBASIC7□□□□□ -1.29
LHX1P48742 AC089999.3-201ENST00000622440 577 ntBASIC7□□□□□ -1.29
LHX1P48742 RPSAP68-201ENST00000625020 438 ntBASIC7□□□□□ -1.29
LHX1P48742 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7□□□□□ -1.29
LHX1P48742 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7□□□□□ -1.29
LHX1P48742 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7□□□□□ -1.29
LHX1P48742 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
LHX1P48742 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7□□□□□ -1.29
LHX1P48742 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
LHX1P48742 AC005702.3-201ENST00000585345 1447 ntBASIC7□□□□□ -1.29
LHX1P48742 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
LHX1P48742 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX1P48742 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.99□□□□□ -1.29
LHX1P48742 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.99□□□□□ -1.29
LHX1P48742 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
LHX1P48742 AC245036.1-201ENST00000391727 309 ntBASIC6.99□□□□□ -1.29
LHX1P48742 RPL5P20-201ENST00000403848 896 ntBASIC6.99□□□□□ -1.29
LHX1P48742 RN7SKP129-201ENST00000410288 299 ntBASIC6.99□□□□□ -1.29
LHX1P48742 AL360013.1-201ENST00000419031 858 ntBASIC6.99□□□□□ -1.29
LHX1P48742 RPL7AP51-201ENST00000422016 760 ntBASIC6.99□□□□□ -1.29
LHX1P48742 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.99□□□□□ -1.29
LHX1P48742 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX1P48742 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.99□□□□□ -1.29
LHX1P48742 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.99□□□□□ -1.29
LHX1P48742 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.99□□□□□ -1.29
LHX1P48742 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.99□□□□□ -1.29
LHX1P48742 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.99□□□□□ -1.29
LHX1P48742 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX1P48742 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.99□□□□□ -1.29
LHX1P48742 MT1CP-201ENST00000567054 174 ntBASIC6.99□□□□□ -1.29
LHX1P48742 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.99□□□□□ -1.29
LHX1P48742 AC011500.1-201ENST00000601963 469 ntBASIC6.99□□□□□ -1.29
LHX1P48742 AC011891.2-201ENST00000604949 397 ntBASIC6.99□□□□□ -1.29
LHX1P48742 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.99□□□□□ -1.29
LHX1P48742 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX1P48742 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 AL139384.2-201ENST00000613809 3590 ntBASIC6.99□□□□□ -1.29
LHX1P48742 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.99□□□□□ -1.29
LHX1P48742 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX1P48742 XKRY2-202ENST00000623874 1581 ntBASIC6.99□□□□□ -1.29
LHX1P48742 XKRY-202ENST00000624960 1581 ntBASIC6.99□□□□□ -1.29
LHX1P48742 AC022613.3-201ENST00000560740 1346 ntBASIC6.99□□□□□ -1.29
LHX1P48742 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX1P48742 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX1P48742 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 AL596244.1-201ENST00000567068 3779 ntBASIC6.98□□□□□ -1.29
LHX1P48742 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX1P48742 RPS2P45-201ENST00000469997 2057 ntBASIC6.98□□□□□ -1.29
LHX1P48742 CASC19-228ENST00000641414 1684 ntBASIC6.98□□□□□ -1.29
LHX1P48742 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LHX1P48742 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX1P48742 RNU1-24P-201ENST00000364285 165 ntBASIC6.98□□□□□ -1.29
LHX1P48742 RNU1-84P-201ENST00000365447 164 ntBASIC6.98□□□□□ -1.29
LHX1P48742 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LHX1P48742 MIR640-201ENST00000385086 96 ntBASIC6.98□□□□□ -1.29
LHX1P48742 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms