Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.08□□□□□ -1.44
APOBEC1P41238 PFN1P11-201ENST00000445829 389 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AL079303.1-201ENST00000486611 463 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.08□□□□□ -1.44
APOBEC1P41238 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AL445383.1-201ENST00000554689 874 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AC012467.1-201ENST00000607740 256 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AL137000.1-201ENST00000610528 1244 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AL391597.1-201ENST00000618707 694 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AC006328.2-201ENST00000623198 397 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AC012005.2-201ENST00000624333 397 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.08□□□□□ -1.44
APOBEC1P41238 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.08□□□□□ -1.44
APOBEC1P41238 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.08□□□□□ -1.44
APOBEC1P41238 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.08□□□□□ -1.44
APOBEC1P41238 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOBEC1P41238 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOBEC1P41238 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
APOBEC1P41238 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOBEC1P41238 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.08□□□□□ -1.44
APOBEC1P41238 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
APOBEC1P41238 AC087392.3-202ENST00000358446 1754 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 MTCO1P25-201ENST00000414449 1799 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AC009220.2-201ENST00000489759 1751 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOBEC1P41238 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.08□□□□□ -1.44
APOBEC1P41238 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOBEC1P41238 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOBEC1P41238 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOBEC1P41238 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.08□□□□□ -1.44
APOBEC1P41238 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
APOBEC1P41238 MAPK10-357ENST00000641831 2858 ntBASIC6.08□□□□□ -1.44
APOBEC1P41238 AC007012.2-201ENST00000623206 1676 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL596244.1-201ENST00000567068 3779 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 MROH3P-201ENST00000435735 2676 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL512353.3-201ENST00000417517 1326 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.07□□□□□ -1.44
APOBEC1P41238 RN7SKP257-201ENST00000364525 309 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 RN7SKP191-201ENST00000364713 306 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 RNA5SP355-201ENST00000365317 135 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
APOBEC1P41238 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
APOBEC1P41238 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 OR52N3P-201ENST00000413417 934 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.07□□□□□ -1.44
APOBEC1P41238 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 RN7SL372P-201ENST00000461982 298 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AC018639.1-201ENST00000492994 442 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AGGF1P3-201ENST00000493675 1213 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 MORF4L2P1-201ENST00000503761 858 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL390198.2-201ENST00000510553 222 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 SCARNA11.1-201ENST00000516918 132 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC089984.3-201ENST00000552838 363 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.07□□□□□ -1.44
APOBEC1P41238 SETP3-201ENST00000581726 813 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AC011921.2-201ENST00000589465 152 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC087468.1-201ENST00000604365 630 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AC138473.1-201ENST00000605717 526 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOBEC1P41238 AL354718.1-201ENST00000619764 589 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 MIR7854-201ENST00000620068 65 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AC127071.2-201ENST00000623293 527 ntBASIC6.07□□□□□ -1.44
APOBEC1P41238 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.07□□□□□ -1.44
APOBEC1P41238 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms