Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RPS4XP19-201ENST00000460237 736 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 MYL6P4-201ENST00000477911 453 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 RPL23AP68-201ENST00000480924 445 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 RN7SL338P-201ENST00000481467 293 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AC107956.2-201ENST00000496042 454 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AC136777.2-201ENST00000522979 358 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 HMGN2P47-201ENST00000559378 272 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AL035410.2-201ENST00000604963 864 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 FAM27E3-202ENST00000614611 340 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 C18orf12-201ENST00000623329 537 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 AP000577.1-201ENST00000624366 878 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DMAP28067 KYNUP3-201ENST00000574386 1341 ntBASIC5.68□□□□□ -1.5
HLA-DMAP28067 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DMAP28067 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DMAP28067 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DMAP28067 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DMAP28067 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL731532.1-201ENST00000623972 4236 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 CASC19-228ENST00000641414 1684 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 RNU1-46P-201ENST00000384425 164 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL023284.3-201ENST00000407767 334 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 CYCSP17-201ENST00000407870 315 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 VDAC1P10-201ENST00000416715 891 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC002367.1-201ENST00000416765 405 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC239367.3-201ENST00000428996 814 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 HBBP1-201ENST00000433329 439 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 ARMC8P1-201ENST00000443069 1289 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 GAPDHP20-201ENST00000444107 1007 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC236972.4-201ENST00000458091 963 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL591122.1-201ENST00000487348 492 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 CHCHD2P7-201ENST00000508008 452 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC023794.3-204ENST00000510754 236 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 RN7SL155P-201ENST00000581538 263 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AP001357.1-201ENST00000586304 1053 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC004908.1-201ENST00000606572 541 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 GUCY1B2-204ENST00000531898 1979 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AL157831.2-201ENST00000564681 3095 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC004656.1-201ENST00000568479 4951 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 AC105235.1-201ENST00000623208 1816 ntBASIC5.67□□□□□ -1.5
HLA-DMAP28067 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DMAP28067 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DMAP28067 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DMAP28067 CAP1P2-201ENST00000417455 1409 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DMAP28067 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 SNORA35-201ENST00000386104 128 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 RNA5SP35-201ENST00000391257 129 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms