Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC8.36□□□□□ -1.07
VARSP26640 IMPA1P1-201ENST00000510718 842 ntBASIC8.36□□□□□ -1.07
VARSP26640 snoZ278.1-201ENST00000517059 112 ntBASIC8.36□□□□□ -1.07
VARSP26640 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC8.36□□□□□ -1.07
VARSP26640 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC8.36□□□□□ -1.07
VARSP26640 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.36□□□□□ -1.07
VARSP26640 IGHV3-36-201ENST00000520848 401 ntBASIC8.36□□□□□ -1.07
VARSP26640 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.36□□□□□ -1.07
VARSP26640 ULK4P3-201ENST00000563895 440 ntBASIC8.36□□□□□ -1.07
VARSP26640 VN1R65P-201ENST00000566443 808 ntBASIC8.36□□□□□ -1.07
VARSP26640 AC012182.1-201ENST00000570133 895 ntBASIC8.36□□□□□ -1.07
VARSP26640 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC8.36□□□□□ -1.07
VARSP26640 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC8.36□□□□□ -1.07
VARSP26640 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.36□□□□□ -1.07
VARSP26640 MIR1302-2-201ENST00000607096 138 ntBASIC8.36□□□□□ -1.07
VARSP26640 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC8.36□□□□□ -1.07
VARSP26640 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC8.36□□□□□ -1.07
VARSP26640 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC8.36□□□□□ -1.07
VARSP26640 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 LINC01739-205ENST00000641890 573 ntBASIC8.36□□□□□ -1.07
VARSP26640 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
VARSP26640 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VARSP26640 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VARSP26640 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
VARSP26640 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VARSP26640 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 SAMM50P1-201ENST00000455403 1399 ntBASIC8.35□□□□□ -1.07
VARSP26640 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 AC130456.1-201ENST00000565085 1363 ntBASIC8.35□□□□□ -1.07
VARSP26640 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 AC012467.2-201ENST00000607783 2583 ntBASIC8.35□□□□□ -1.07
VARSP26640 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
VARSP26640 OR1L1-202ENST00000373686 1083 ntBASIC8.35□□□□□ -1.07
VARSP26640 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 MIR30C1-201ENST00000385227 89 ntBASIC8.35□□□□□ -1.07
VARSP26640 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
VARSP26640 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 UQCRHP2-201ENST00000415651 288 ntBASIC8.35□□□□□ -1.07
VARSP26640 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 AL050341.1-201ENST00000447743 313 ntBASIC8.35□□□□□ -1.07
VARSP26640 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.35□□□□□ -1.07
VARSP26640 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC8.35□□□□□ -1.07
VARSP26640 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 RBM43P1-201ENST00000476891 1081 ntBASIC8.35□□□□□ -1.07
VARSP26640 AC091959.2-201ENST00000477363 321 ntBASIC8.35□□□□□ -1.07
VARSP26640 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 AC010342.1-201ENST00000514047 877 ntBASIC8.35□□□□□ -1.07
VARSP26640 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
VARSP26640 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 EIF5AP3-201ENST00000589460 462 ntBASIC8.35□□□□□ -1.07
VARSP26640 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC8.35□□□□□ -1.07
VARSP26640 AP004372.1-201ENST00000604842 844 ntBASIC8.35□□□□□ -1.07
VARSP26640 AP000894.4-201ENST00000610185 483 ntBASIC8.35□□□□□ -1.07
VARSP26640 AL592227.1-201ENST00000614748 126 ntBASIC8.35□□□□□ -1.07
VARSP26640 AC012100.3-201ENST00000624738 575 ntBASIC8.35□□□□□ -1.07
VARSP26640 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.35□□□□□ -1.07
VARSP26640 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VARSP26640 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms