Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.24□□□□□ -1.25
TPM1P09493 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.24□□□□□ -1.25
TPM1P09493 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
TPM1P09493 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
TPM1P09493 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.24□□□□□ -1.25
TPM1P09493 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.24□□□□□ -1.25
TPM1P09493 AC011369.2-201ENST00000624423 1567 ntBASIC7.24□□□□□ -1.25
TPM1P09493 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM1P09493 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TPM1P09493 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
TPM1P09493 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM1P09493 AL731532.1-201ENST00000623972 4236 ntBASIC7.23□□□□□ -1.25
TPM1P09493 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM1P09493 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM1P09493 RNA5SP474-201ENST00000391234 90 ntBASIC7.23□□□□□ -1.25
TPM1P09493 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.23□□□□□ -1.25
TPM1P09493 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.23□□□□□ -1.25
TPM1P09493 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 AC021876.1-201ENST00000425959 359 ntBASIC7.23□□□□□ -1.25
TPM1P09493 AC097721.1-201ENST00000427150 1253 ntBASIC7.23□□□□□ -1.25
TPM1P09493 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.23□□□□□ -1.25
TPM1P09493 VDAC2P3-201ENST00000430995 828 ntBASIC7.23□□□□□ -1.25
TPM1P09493 VN1R38P-201ENST00000450265 887 ntBASIC7.23□□□□□ -1.25
TPM1P09493 AL096803.1-201ENST00000456921 1021 ntBASIC7.23□□□□□ -1.25
TPM1P09493 RN7SL654P-201ENST00000479178 292 ntBASIC7.23□□□□□ -1.25
TPM1P09493 RNA5SP318-201ENST00000516352 92 ntBASIC7.23□□□□□ -1.25
TPM1P09493 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.23□□□□□ -1.25
TPM1P09493 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.23□□□□□ -1.25
TPM1P09493 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.23□□□□□ -1.25
TPM1P09493 HNRNPCP1-201ENST00000556181 766 ntBASIC7.23□□□□□ -1.25
TPM1P09493 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.23□□□□□ -1.25
TPM1P09493 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.23□□□□□ -1.25
TPM1P09493 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
TPM1P09493 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.23□□□□□ -1.25
TPM1P09493 AL589765.5-201ENST00000596133 515 ntBASIC7.23□□□□□ -1.25
TPM1P09493 BUB1P1-201ENST00000603541 607 ntBASIC7.23□□□□□ -1.25
TPM1P09493 AL356986.1-201ENST00000604085 341 ntBASIC7.23□□□□□ -1.25
TPM1P09493 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.23□□□□□ -1.25
TPM1P09493 AL162377.2-201ENST00000624532 337 ntBASIC7.23□□□□□ -1.25
TPM1P09493 OR5G5P-204ENST00000627642 621 ntBASIC7.23□□□□□ -1.25
TPM1P09493 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TPM1P09493 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM1P09493 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.23□□□□□ -1.25
TPM1P09493 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
TPM1P09493 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
TPM1P09493 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.23□□□□□ -1.25
TPM1P09493 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TPM1P09493 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.22□□□□□ -1.25
TPM1P09493 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
TPM1P09493 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.22□□□□□ -1.25
TPM1P09493 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.22□□□□□ -1.25
TPM1P09493 RN7SL145P-201ENST00000469955 296 ntBASIC7.22□□□□□ -1.25
TPM1P09493 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 MARK2P8-201ENST00000476069 952 ntBASIC7.22□□□□□ -1.25
TPM1P09493 PPP1R2P6-201ENST00000478565 588 ntBASIC7.22□□□□□ -1.25
TPM1P09493 RN7SL314P-201ENST00000490735 292 ntBASIC7.22□□□□□ -1.25
TPM1P09493 AC091965.3-201ENST00000506236 208 ntBASIC7.22□□□□□ -1.25
TPM1P09493 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 MTCYBP44-201ENST00000514835 823 ntBASIC7.22□□□□□ -1.25
TPM1P09493 IGKV2-19-201ENST00000518132 283 ntBASIC7.22□□□□□ -1.25
TPM1P09493 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.22□□□□□ -1.25
TPM1P09493 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TPM1P09493 MIR5705-201ENST00000579870 89 ntBASIC7.22□□□□□ -1.25
TPM1P09493 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.22□□□□□ -1.25
TPM1P09493 AC092960.1-201ENST00000604762 351 ntBASIC7.22□□□□□ -1.25
TPM1P09493 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.22□□□□□ -1.25
TPM1P09493 AC008626.2-201ENST00000624425 248 ntBASIC7.22□□□□□ -1.25
TPM1P09493 AL132640.3-201ENST00000630473 177 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms