Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL157698.1-201ENST00000415190 1011 ntBASIC6.15□□□□□ -1.42
SSX4O60224 RPL17P17-201ENST00000419491 557 ntBASIC6.15□□□□□ -1.42
SSX4O60224 KATNBL1P2-201ENST00000433311 835 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AL356121.1-201ENST00000442911 156 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 CEACAMP11-201ENST00000455211 583 ntBASIC6.15□□□□□ -1.42
SSX4O60224 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 RPSAP48-201ENST00000466509 889 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 TECRP2-201ENST00000503270 928 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AP001960.1-201ENST00000506494 658 ntBASIC6.15□□□□□ -1.42
SSX4O60224 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SSX4O60224 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.15□□□□□ -1.42
SSX4O60224 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SSX4O60224 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.15□□□□□ -1.42
SSX4O60224 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 MIR3135A-201ENST00000578460 77 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AC020658.4-201ENST00000613987 684 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AC098590.2-201ENST00000614787 281 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AC131009.3-201ENST00000621809 287 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AC243960.7-201ENST00000623532 707 ntBASIC6.15□□□□□ -1.42
SSX4O60224 AC063952.1-203ENST00000634410 658 ntBASIC6.15□□□□□ -1.42
SSX4O60224 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.15□□□□□ -1.42
SSX4O60224 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.15□□□□□ -1.43
SSX4O60224 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SSX4O60224 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.15□□□□□ -1.43
SSX4O60224 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SSX4O60224 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SSX4O60224 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SSX4O60224 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SSX4O60224 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SSX4O60224 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX4O60224 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SSX4O60224 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX4O60224 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 HSPD1P1-201ENST00000503199 1726 ntBASIC6.14□□□□□ -1.43
SSX4O60224 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SSX4O60224 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX4O60224 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SSX4O60224 OR10D1P-201ENST00000355343 936 ntBASIC6.14□□□□□ -1.43
SSX4O60224 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 RNA5SP114-201ENST00000363780 113 ntBASIC6.14□□□□□ -1.43
SSX4O60224 RNU1-56P-201ENST00000391303 164 ntBASIC6.14□□□□□ -1.43
SSX4O60224 PDCL3P5-201ENST00000398028 722 ntBASIC6.14□□□□□ -1.43
SSX4O60224 RN7SKP268-201ENST00000411107 316 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 YWHAZP5-201ENST00000419975 730 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AKR1B10P1-201ENST00000425765 942 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SSX4O60224 PUDPP2-201ENST00000431423 643 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AL731892.1-201ENST00000437364 1192 ntBASIC6.14□□□□□ -1.43
SSX4O60224 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX4O60224 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.14□□□□□ -1.43
SSX4O60224 OR7E7P-201ENST00000455678 1012 ntBASIC6.14□□□□□ -1.43
SSX4O60224 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 AC135721.2-201ENST00000464237 300 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC040975.1-201ENST00000472104 316 ntBASIC6.14□□□□□ -1.43
SSX4O60224 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 RN7SL868P-201ENST00000485915 303 ntBASIC6.14□□□□□ -1.43
SSX4O60224 MRPL57P6-201ENST00000506570 309 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 AC113398.2-201ENST00000507630 558 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 SNORD116-30-201ENST00000516468 85 ntBASIC6.14□□□□□ -1.43
SSX4O60224 RNU4-18P-201ENST00000516751 149 ntBASIC6.14□□□□□ -1.43
SSX4O60224 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.14□□□□□ -1.43
SSX4O60224 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX4O60224 AP002004.1-206ENST00000532441 876 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.14□□□□□ -1.43
SSX4O60224 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 NDUFA3P4-201ENST00000560814 250 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 RN7SL32P-201ENST00000580514 281 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC087468.1-201ENST00000604365 630 ntBASIC6.14□□□□□ -1.43
SSX4O60224 AC025287.2-201ENST00000621911 668 ntBASIC6.14□□□□□ -1.43
SSX4O60224 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX4O60224 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.14□□□□□ -1.43
SSX4O60224 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
SSX4O60224 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 AC079248.1-201ENST00000427568 1546 ntBASIC6.14□□□□□ -1.43
SSX4O60224 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSX4O60224 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.14□□□□□ -1.43
SSX4O60224 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms