Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CLIP2Q9UDT6 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP2Q9UDT6 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP2Q9UDT6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP2Q9UDT6 AL359195.2-201ENST00000623657 4412 ntBASIC7.93□□□□□ -1.14
CLIP2Q9UDT6 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.93□□□□□ -1.14
CLIP2Q9UDT6 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 SNORA70.3-201ENST00000365075 132 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC121334.1-201ENST00000396414 802 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 RPL12P23-201ENST00000405880 490 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC128677.1-201ENST00000436016 442 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 NPM1P23-201ENST00000440193 849 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC099670.1-201ENST00000455141 783 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 RPL7AP23-201ENST00000482625 776 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC116917.1-201ENST00000520558 305 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 MIR3157-201ENST00000578688 85 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AC068726.1-201ENST00000610993 341 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 GAPDHP41-201ENST00000613707 975 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 MIR6823-201ENST00000622118 61 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 AL354702.2-202ENST00000641481 890 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 RACGAP1P-201ENST00000550663 1879 ntBASIC7.92□□□□□ -1.14
CLIP2Q9UDT6 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 RNA5SP85-201ENST00000365378 119 ntBASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AC005519.1-201ENST00000554490 601 ntBASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 FXNP1-201ENST00000555153 337 ntBASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 ANP32BP1-202ENST00000568553 737 ntBASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 AL591848.4-201ENST00000567832 3472 ntBASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP2Q9UDT6 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms