Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC010624.4-201ENST00000597606 1351 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC003045.1-201ENST00000398779 713 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 CEACAMP11-201ENST00000455211 583 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 RBMY2HP-201ENST00000457961 720 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC022206.1-201ENST00000495947 347 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 RN7SL612P-201ENST00000497704 295 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 GUSBP9-201ENST00000510138 584 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AP001000.1-201ENST00000526843 742 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC139493.1-201ENST00000604368 397 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 WBP1LP12-201ENST00000604449 331 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC025171.4-201ENST00000607250 1047 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 LINC02495-203ENST00000636704 242 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 AC061975.7-201ENST00000592016 2692 ntBASIC9.43□□□□□ -0.9
SIN3AQ96ST3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.43□□□□□ -0.9
SIN3AQ96ST3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 RPL31P11-201ENST00000426558 1558 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 MIR551B-201ENST00000384984 96 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 AL133260.1-201ENST00000405720 405 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 KF459542.1-201ENST00000450908 553 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 AC092349.1-201ENST00000504903 310 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 5S_rRNA.29-201ENST00000641250 107 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 AC105749.1-201ENST00000631338 2008 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 NACA-203ENST00000454682 6629 ntTSL 5 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 AL157831.2-201ENST00000564681 3095 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 LRRC37A16P-202ENST00000586022 3725 ntBASIC9.42□□□□□ -0.9
SIN3AQ96ST3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC9.42□□□□□ -0.9
SIN3AQ96ST3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 RNA5SP77-201ENST00000365394 120 ntBASIC9.41□□□□□ -0.9
SIN3AQ96ST3 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 RN7SKP129-201ENST00000410288 299 ntBASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 NPM1P23-201ENST00000440193 849 ntBASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AC084337.1-201ENST00000524809 686 ntBASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 AL121936.2-201ENST00000641935 662 ntBASIC9.41□□□□□ -0.9
SIN3AQ96ST3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC9.41□□□□□ -0.9
SIN3AQ96ST3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC9.4□□□□□ -0.9
SIN3AQ96ST3 CYP2G2P-201ENST00000594920 1485 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms