Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 OR5M2P-202ENST00000641241 4242 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC093671.1-201ENST00000624981 2929 ntBASIC4.96□□□□□ -1.61
AP1S3Q96PC3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.96□□□□□ -1.61
AP1S3Q96PC3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
AP1S3Q96PC3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
AP1S3Q96PC3 OR2A3P-202ENST00000641249 1776 ntBASIC4.96□□□□□ -1.61
AP1S3Q96PC3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
AP1S3Q96PC3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
AP1S3Q96PC3 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC4.96□□□□□ -1.61
AP1S3Q96PC3 AL359263.1-201ENST00000441188 2796 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 RNA5SP396-201ENST00000364834 120 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 HNRNPCP2-201ENST00000399515 881 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 VDAC1P10-201ENST00000416715 891 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC245452.2-201ENST00000435222 392 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AL355355.1-201ENST00000442900 793 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 CYCSP44-201ENST00000448560 313 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AL139156.3-201ENST00000454802 394 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 RN7SL338P-201ENST00000481467 293 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 RN7SL519P-201ENST00000497925 288 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC106774.2-201ENST00000510266 406 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC097486.1-201ENST00000515331 210 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 IGLVV-66-201ENST00000523818 341 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC025252.2-201ENST00000537470 502 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC007537.1-201ENST00000539347 327 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 OR4F28P-201ENST00000559128 938 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC004232.1-201ENST00000571388 208 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 OR4F8P-201ENST00000589943 937 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AP000436.1-201ENST00000605239 800 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 OR7E161P-202ENST00000641994 1033 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC083843.2-201ENST00000568248 6253 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AC140479.2-201ENST00000421567 3130 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AL451064.2-201ENST00000623514 1654 ntBASIC4.96□□□□□ -1.62
AP1S3Q96PC3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
AP1S3Q96PC3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 AC119674.1-213ENST00000641177 1386 ntBASIC4.95□□□□□ -1.62
AP1S3Q96PC3 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP1S3Q96PC3 SNORA51.7-201ENST00000384171 134 ntBASIC4.95□□□□□ -1.62
AP1S3Q96PC3 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms