Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC093815.1-201ENST00000508637 280 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC083906.1-201ENST00000509298 406 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC016559.1-201ENST00000511420 199 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 RPS20-202ENST00000518875 671 ntTSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC100854.1-201ENST00000520351 341 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 MIR3689C-201ENST00000581239 72 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 RN7SL664P-201ENST00000584239 305 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL161420.1-201ENST00000619393 264 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC018628.1-201ENST00000624147 3819 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 ZNF969P-201ENST00000510345 2341 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC090774.4-201ENST00000578888 1372 ntBASIC5.66□□□□□ -1.5
BEST4Q8NFU0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BEST4Q8NFU0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL592429.1-201ENST00000403909 1473 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 MSL3P1-202ENST00000440028 1468 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC102941.1-201ENST00000567616 1537 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 RNU4-81P-201ENST00000363561 144 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC090114.1-201ENST00000393266 448 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 PCNAP3-201ENST00000397222 778 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL691447.1-201ENST00000419456 387 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC021876.1-201ENST00000425959 359 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL645936.2-201ENST00000430565 928 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 FTLP17-201ENST00000432567 525 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 MYL6P3-201ENST00000436904 432 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 MGAT2P1-201ENST00000449718 797 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 GOT2P2-201ENST00000450663 1251 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 MEF2AP1-201ENST00000454867 863 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 RPS26P11-201ENST00000463445 348 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 RN7SL228P-201ENST00000470060 303 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 RPL7P17-201ENST00000470927 724 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 RPL23AP80-201ENST00000495605 424 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 OR7E161P-201ENST00000533722 967 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL049869.4-201ENST00000555669 178 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 RN7SL25P-201ENST00000583862 260 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 BOLA2P1-201ENST00000584794 232 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AL136139.1-201ENST00000605568 222 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 AC005899.7-201ENST00000618199 588 ntBASIC5.65□□□□□ -1.5
BEST4Q8NFU0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BEST4Q8NFU0 DLEU2L-201ENST00000371086 3555 ntBASIC5.65□□□□□ -1.51
BEST4Q8NFU0 AC092070.2-203ENST00000598377 3644 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms