Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 BRWD1P3-201ENST00000428816 390 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC110602.1-201ENST00000437414 318 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PVT1-214ENST00000522875 922 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 IGKV2OR2-1-201ENST00000605129 304 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC073592.6-201ENST00000624271 415 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC073488.9-201ENST00000631601 754 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 BRAFP1-201ENST00000445336 2703 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 OR6R1P-201ENST00000431838 940 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 GAPDHP59-201ENST00000435908 267 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC007068.2-201ENST00000543168 395 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 NPIPB1P-202ENST00000588786 828 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MIR6806-201ENST00000622141 64 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 EEF1A1P12-201ENST00000443590 1346 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PPIAP27-201ENST00000453800 265 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SCG5-207ENST00000497208 949 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 OR4A1P-201ENST00000532342 920 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CCL2-202ENST00000580907 736 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 DDX10P2-201ENST00000417796 2614 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC217777.1-201ENST00000570034 1471 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 STAG3L4-201ENST00000352103 530 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL157702.1-201ENST00000398764 426 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC083806.1-201ENST00000468934 316 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC112484.3-201ENST00000505910 329 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CR382285.1-202ENST00000604687 547 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SNORD91A-202ENST00000609620 191 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL080312.2-201ENST00000613001 630 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms