Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
DEPDC4Q8N2C3 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 TRIM53BP-201ENST00000532912 1720 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 TDGF1P3-202ENST00000602699 2710 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 ZNF733P-202ENST00000444809 1573 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC106872.5-201ENST00000508856 1416 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 GLULP5-201ENST00000547831 1390 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC008985.1-201ENST00000624169 2239 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC109315.1-201ENST00000584143 1347 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC211476.4-201ENST00000275546 699 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 PMS2P5-201ENST00000398065 516 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 NIP7P3-201ENST00000404319 515 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 GULP1-205ENST00000409805 983 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 RN7SKP110-201ENST00000410146 285 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 OR51A8P-201ENST00000421277 940 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 RPL5P6-201ENST00000425640 886 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 GAPDHP34-201ENST00000432112 823 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC242426.1-201ENST00000435270 960 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 TMX2P1-201ENST00000436507 708 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 DNAJC19P4-201ENST00000440115 345 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 HMGN1P32-201ENST00000441744 256 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AMD1P3-201ENST00000508874 994 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 RNU6-1225P-201ENST00000516336 65 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 RNU6-506P-201ENST00000516553 94 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 PSAT1P1-201ENST00000518968 1106 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC009063.1-201ENST00000563342 702 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC034105.5-201ENST00000564017 314 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MIR3972-201ENST00000582732 87 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AL645949.1-202ENST00000600073 242 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AL022154.1-201ENST00000604698 785 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC104985.2-201ENST00000620598 500 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC093648.1-201ENST00000623546 606 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 SEM1-224ENST00000623693 729 ntTSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC105339.4-201ENST00000624471 737 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AC128688.2-201ENST00000563632 1937 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
DEPDC4Q8N2C3 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
DEPDC4Q8N2C3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms