Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 RANP6-201ENST00000413691 644 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AL713922.1-201ENST00000416477 747 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 COL11A2P1-205ENST00000441798 676 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AL445991.1-201ENST00000450381 475 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 RN7SL612P-201ENST00000497704 295 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 NACAP5-201ENST00000509863 636 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 RNA5SP116-201ENST00000516132 98 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AC018558.5-201ENST00000565840 952 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AL157899.1-201ENST00000604110 936 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AC068726.1-201ENST00000610993 341 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 MIR6813-201ENST00000621638 56 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AC007012.2-201ENST00000623206 1676 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 MAPK10-357ENST00000641831 2858 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 AL139384.2-201ENST00000613809 3590 ntBASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
C9orf40Q8IXQ3 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 RNA5SP85-201ENST00000365378 119 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AL034417.1-201ENST00000399343 800 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AL359092.1-201ENST00000417156 265 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 FAM183DP-201ENST00000421987 399 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC128677.1-201ENST00000436016 442 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 RPL12P49-201ENST00000441100 121 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 TVP23CP1-201ENST00000450317 639 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 RN7SL393P-201ENST00000463588 296 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC063943.2-201ENST00000495697 534 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 SCARNA5-201ENST00000516201 276 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 MIR3157-201ENST00000578688 85 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 MIR4732-201ENST00000581873 76 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 MIR212-201ENST00000586026 110 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AL359704.2-201ENST00000604335 521 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC114477.1-201ENST00000605097 605 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC005393.1-201ENST00000617916 584 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC012653.2-201ENST00000621880 420 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC009120.2-204ENST00000621548 2032 ntBASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf40Q8IXQ3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 LPAL2-203ENST00000454031 2498 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 MAPK10-344ENST00000641718 3746 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC217777.1-201ENST00000570034 1471 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AC022613.3-201ENST00000560740 1346 ntBASIC6.1□□□□□ -1.43
C9orf40Q8IXQ3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms