Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL117692.1-201ENST00000494283 713 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 OR9G2P-201ENST00000533326 880 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC016144.1-201ENST00000548175 1087 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AL591767.3-201ENST00000554632 525 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC018558.5-201ENST00000565840 952 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 SNORA70D-201ENST00000578836 135 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 CTSLP2-201ENST00000580501 394 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC012175.1-201ENST00000603755 531 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC009779.8-202ENST00000607990 932 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 MIR7854-201ENST00000620068 65 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC005034.3-201ENST00000604845 1747 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC083806.2-201ENST00000617795 2685 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AL663061.1-201ENST00000416625 580 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 PFN1P11-201ENST00000445829 389 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 UBBP5-201ENST00000446970 266 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 RPL26P30-201ENST00000453533 435 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 RPS7P10-201ENST00000464254 603 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AL390198.2-201ENST00000510553 222 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 OR52H2P-201ENST00000514607 902 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 MIR4732-201ENST00000581873 76 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC068726.1-201ENST00000610993 341 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AL035425.4-201ENST00000624509 1063 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AL354702.2-202ENST00000641481 890 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 CDY10P-201ENST00000452415 1567 ntBASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3F3CQ6NXT2 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 RPL12P23-201ENST00000405880 490 ntBASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 DUTP4-201ENST00000424782 475 ntBASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 BMP6P1-201ENST00000431230 679 ntBASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 CLNS1AP1-201ENST00000435954 682 ntBASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 COL11A2P1-205ENST00000441798 676 ntBASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 MTND6P8-201ENST00000503471 522 ntBASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3CQ6NXT2 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms