Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL132796.3-201ENST00000624703 900 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 SNX18P10-201ENST00000625014 519 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
RHBDL3P58872 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 AL929601.4-201ENST00000613011 1341 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
RHBDL3P58872 LINC01613-201ENST00000561476 2780 ntBASIC7.97□□□□□ -1.13
RHBDL3P58872 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.97□□□□□ -1.13
RHBDL3P58872 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RHBDL3P58872 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
RHBDL3P58872 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
RHBDL3P58872 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RHBDL3P58872 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RHBDL3P58872 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RHBDL3P58872 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
RHBDL3P58872 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.96□□□□□ -1.13
RHBDL3P58872 AC015871.3-201ENST00000618835 2261 ntBASIC7.96□□□□□ -1.13
RHBDL3P58872 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.96□□□□□ -1.13
RHBDL3P58872 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
RHBDL3P58872 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
RHBDL3P58872 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RHBDL3P58872 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
RHBDL3P58872 OR7E25P-201ENST00000344844 931 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 SNORA38B-201ENST00000363524 131 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 MRPS6P2-201ENST00000381143 370 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 RAB5CP1-201ENST00000395972 580 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RHBDL3P58872 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.96□□□□□ -1.14
RHBDL3P58872 RNA5SP198-201ENST00000410376 127 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 RPS7P12-201ENST00000422385 582 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.96□□□□□ -1.14
RHBDL3P58872 AL645939.3-201ENST00000435408 225 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 AC073072.2-201ENST00000447425 348 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 HMGN1P8-201ENST00000463578 288 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.96□□□□□ -1.14
RHBDL3P58872 RNU6-551P-201ENST00000516661 103 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 AC092718.4-201ENST00000566639 716 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 AC133552.4-201ENST00000576103 676 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 AP000577.1-201ENST00000624366 878 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.96□□□□□ -1.14
RHBDL3P58872 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.96□□□□□ -1.14
RHBDL3P58872 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RHBDL3P58872 AC079949.2-201ENST00000617117 2933 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 AC093278.2-201ENST00000564956 2485 ntBASIC7.96□□□□□ -1.14
RHBDL3P58872 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RHBDL3P58872 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RHBDL3P58872 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RHBDL3P58872 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RHBDL3P58872 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
RHBDL3P58872 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.95□□□□□ -1.14
RHBDL3P58872 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 RNU1-84P-201ENST00000365447 164 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 RANP6-201ENST00000413691 644 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.95□□□□□ -1.14
RHBDL3P58872 GPN3P1-201ENST00000423883 535 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.95□□□□□ -1.14
RHBDL3P58872 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC7.95□□□□□ -1.14
RHBDL3P58872 PGBD4P1-201ENST00000473644 407 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.95□□□□□ -1.14
RHBDL3P58872 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.95□□□□□ -1.14
RHBDL3P58872 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.95□□□□□ -1.14
RHBDL3P58872 AC093635.1-201ENST00000609028 555 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 MIR7109-201ENST00000613748 65 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 MIR7854-201ENST00000620068 65 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.95□□□□□ -1.14
RHBDL3P58872 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.95□□□□□ -1.14
RHBDL3P58872 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RHBDL3P58872 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
RHBDL3P58872 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms